Mercurial > repos > greg > multigps
comparison macros.xml @ 0:62bdb6ff11d1 draft default tip
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| author | greg |
|---|---|
| date | Wed, 05 Sep 2018 08:59:42 -0400 |
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| children |
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| -1:000000000000 | 0:62bdb6ff11d1 |
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| 1 <?xml version='1.0' encoding='UTF-8'?> | |
| 2 <macros> | |
| 3 <xml name="motif_finding_params"> | |
| 4 <param name="memenmotifs" type="integer" min="0" value="3" label="Number of motifs MEME should find for each condition" /> | |
| 5 <param name="mememinw" type="integer" min="0" value="6" label="Minimum motif width for MEME" /> | |
| 6 <param name="mememaxw" type="integer" min="0" value="16" label="Maximum motif width for MEME" /> | |
| 7 </xml> | |
| 8 <xml name="param_experiment_type"> | |
| 9 <param name="experiment_type" type="select" display="radio" label="Experiment type for this replicate"> | |
| 10 <option value="chipseq" selected="True">ChIP-seq</option> | |
| 11 <option value="chipexo">ChIP-exo</option> | |
| 12 </param> | |
| 13 </xml> | |
| 14 <xml name="cond_fixedreadcount"> | |
| 15 <conditional name="fixedreadcount_cond"> | |
| 16 <param name="fixedreadcount_select" type="select" label="Set fixed per-base read count limit for this replicate?" help="Selecting No uses a global per-base limit that is estimated from a Poisson distribution."> | |
| 17 <option value="no" selected="True">No</option> | |
| 18 <option value="yes">Yes</option> | |
| 19 </param> | |
| 20 <when value="no"/> | |
| 21 <when value="yes"> | |
| 22 <param name="fixedreadcount" type="integer" value="0" min="0" label="Fixed per-base read count limit"/> | |
| 23 </when> | |
| 24 </conditional> | |
| 25 </xml> | |
| 26 </macros> | |
| 27 |