Mercurial > repos > greg > pima_report

diff pima_report.py @ 22:13a9c8ecd30e draft

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Uploaded
author greg
date Thu, 13 Apr 2023 18:33:19 +0000
parents 667b253329c6
children d89b7d47a85a
line wrap: on
line diff
--- a/pima_report.py	Thu Apr 13 17:13:40 2023 +0000
+++ b/pima_report.py	Thu Apr 13 18:33:19 2023 +0000
@@ -542,6 +542,7 @@
                 contig_title = 'Alignment to %s' % contig
                 self.doc.new_line()
                 self.doc.new_header(level=3, title=contig_title)
+                self.doc.new_line('Blue indicates aligned sequences (to the reference) and yellow indicates missing sequences')
                 self.doc.new_line(self.doc.new_inline_image(text='contig_title', path=os.path.abspath(circos_file)))
                 self.doc.new_line('<div style="page-break-after: always;"></div>')
                 self.doc.new_line()