Mercurial > repos > greg > pima_report

diff pima_report.xml @ 4:428aed51c487 draft

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Uploaded
author greg
date Thu, 09 Mar 2023 16:52:14 +0000
parents 33d9832420c5
children 7177d81eb7cb
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--- a/pima_report.xml	Thu Mar 09 16:44:59 2023 +0000
+++ b/pima_report.xml	Thu Mar 09 16:52:14 2023 +0000
@@ -94,7 +94,7 @@
         <param name="aligned_sample" type="data" format="bam" label="Aligned sample BAM file"/>
         <param name="amr_deletions_file" type="data" format="bed" label="AMR deletions BED file"/>
         <param name="assembly_fasta_file" type="data" format="fasta" label="Assembly FASTA file"/>
-        <param name="blastn_features" format="bam" type="data_collection" collection_type="list" label="Collection of blastn BAM files"/>
+        <param name="blastn_features" format="tabular" type="data_collection" collection_type="list" label="Collection of blastn tabular files"/>
         <param name="compute_sequence_length_file" type="data" format="tabular,tsv" label="Compute sequence length tabular file"/>
         <param name="contig_coverage_file" type="data" format="tabular,tsv" label="Contig coverage tabular file"/>
         <param name="dnadiff_snps_file" type="data" format="tabular" label="DNAdiff snps tabular file"/>