Mercurial > repos > greg > plant_tribes_assembly_post_processor

annotate test-data/transcripts2.pep @ 3:07ee186ba16e draft

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author greg
date Thu, 24 Aug 2017 13:10:29 -0400
parents fcc558568020
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1 >contig_1; 91 1 346 minus strand; translated
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2 XKKLYGDKEDILVPDIFWDYTSGKVLTMEWVEGVKLNEQDAVESQGLSVLDLVNTGIQCS
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3 LRQLLEYGYFHADPHPGNLLATPDGKLAFLDFGMMSETPEQARSAIIGHVVHMVNR
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4 >contig_2 218 1 511 ; translated
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5 XLSKVPIPSNNIYAINDKKSPEDAADDYENRLKELVSEKIIPVSTISGFPKFDLMLLGMG
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6 PDGHVASLFPSHMQRYEKEKWVTFITDSPKPPPSRITFTFPMINSASEIAMVVTGADLAG
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7 TTKIALGTTGNVKPGETPLPCTEVSAEGEVTWFLDKDAASQLLNYVRFDD
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8 >contig_3; 134 1 379 minus strand; translated
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9 XVDEGVVVAGLSEQEKASVSEILTTARAHSETIENLKRDHSQQVSCIEQHTNDTFRQKYM
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10 DYEPTGSTPVRSEPDIPSKGTIESLRAMPIDALEEEFRENHSYESAVTGKELMPSVTTRA
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11 PFSQIN
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12 >contig_5; -67 1 418 minus strand; translated
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13 XGGPPQTHVKRDPASRGLFHAVVPALGPLRDARREGRFGRCRVMPGPDIIKEHSVVPTLA
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14 FDDVLGRLAKYRRRASXGAMNPGDASQVTRGAAGESLLALAPSALVLGEEGPTADVEPDD
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15 GRFEQVRSGKGXHGKGDTLT
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16 >contig_7 103 1 296 ; translated
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17 ENEWSGAEFLNEMAAMMTQNKSNENGTGTFEELQQLFDEMFQSDIESFNGCSSSSNETCS
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18 NSNKRNSIESSSANFRPENGNESGEISGKKNTRKGKGDX
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19 >contig_9 34 1 396 ; translated
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20 XLRLKADEEAQCLNQMQRIIFDEIMEHVELEKGGFYFVYRPGGNGKTLWLAIISKLRSEG
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21 RIVLAVASSGIALLLVEGGRTAHSRFKIPIDVNEYNNCEIKQNIYLAELICHTNLVIWDE
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22 APMTQYFVFEAVX
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23 >contig_10; 78 87 343 minus strand; translated
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24 MAEENTTTMNLDLNLGPINNSSDDSEPSSRPYTDVAMNLEDWLDSPVRVREVVRHRNHRW
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25 RSLWRQIPIPPDTRNLALELIGGNAP