Mercurial > repos > greg > plant_tribes_gene_family_aligner

comparison test-data/39614.faa.aln @ 6:3384b6a842b0 draft

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author greg
date Mon, 30 Oct 2017 09:52:00 -0400
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5:a73c2e65098e 6:3384b6a842b0
1 >gnl_Orysa6.0_PACid_16878968
2 M-----------------------------------------------------------
3 ------------------------------------------------------------
4 ------------------------------------------------------------
5 -----------------------------------------SHMEAFQNVVLLHKANSNS
6 TLEDISSLSAASCCSLDQLLACVEGEAQKIFGDIQNLLADHRSEVAHFTQELRESFRISL
7 DRTKDMSSFILGLFDKYVEETSKLQSHSNHTHEAQVKSLEDFQKAYEEQSKSEEQKLLAD
8 ITSLVSKHVTRQRELVGGRLNSLGDAARGNKAFLDEHTSAMEVVTKDAKRKWEMFAEQAE
9 NDCKVGSNFSAAKHCRMETILQECACTVDTAAQQWKASHATVNDLCRKQIAEVEALVRSA
10 IETNEQHEAEIASSRATAEEHASNSSKDLLQDVDNMLQEARNSSSRVVSTVEAHLGESQH
11 LQESHSSHTAGINTHADNAFQSSYKDYEPTGETPVRSEPEVPSKDAIESLRAMPMESLMD
12 EFRENHPYEPS---KDRRPSLIPRSPLATINN
13 >gnl_Phoda3.0_PDK_30s1023721g001
14 VNQKMMKCTLIKDLYGEIERLKAEVYAAREKVGVYIPKERYHQEESERKAMAEQIEQMGV
15 LLENNQKQIEDLQERYNTQLQQSDDLSKKLDATEILCVSLSKKLDATEKSLEHTSKLLAA
16 AREDLKQAQYTLKEKDFVISEQRKAAREDKLNTANRSIVNNFRADLATRVGTLCNTVVAS
17 LDRQNEHLQSVEKLCQSSLDFHDKAVSELKRKVSASRALYTSHMEALQNVVRLHKASSNA
18 SLEEMSSMISANTCSLDQLLALGQSEADLIFSDLQSILSIHRGEIANFTRELREKFQVNL
19 DRTKEMSNFILELLEKIGKGTKEFQNDSTLVHEAQVKSIGDFQKAYE-------------
20 ---------------VEVRLTGLGDAARDSKAIMDNHASSMDIVTTDAKRKWEEYSKQAE
21 QDSEDGSNFSAAKHCRMELMLQQCVNSVDATSQQWKKTHASVSEMSSKHVAEIEALVRSA
22 IESNDQHDAEVASARMAAEEDVAKNSKDVLQHFDTVIDHERNSAAGVMAAVEAHSATLHK
23 LQEEQSSQATEINSHAEDTFQNTYMDYEPTGETPTRSEPDIPSRGTIESLRAMPIEALLE
24 EFRENHPYES----KEPKPSLIPRSPLVQLN-
25 >contig_3
26 X-----------------------------------------------------------
27 ------------------------------------------------------------
28 ------------------------------------------------------------
29 ------------------------------------------------------------
30 ------------------------------------------------------------
31 ------------------------------------------------------------
32 ------------------------------------------------------------
33 ---------------------------VD------------------------EGVV---
34 --------------------------------VAGLSEQEKASVSEILTTARAHSETIEN
35 LKRDHSQQVSCIEQHTNDTFRQKYMDYEPTGSTPVRSEPDIPSKGTIESLRAMPIDALEE
36 EFRENHSYESAVTGKELMPSVTTRAPFSQIN-