Mercurial > repos > greg > plant_tribes_gene_family_aligner
comparison test-data/39614.fna.aln @ 11:1c5a484fc06f draft default tip
planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/phylogenetics/plant_tribes/gene_family_aligner commit f7690d10e0515911ee00455806e457bc53f145c7-dirty
| author | greg |
|---|---|
| date | Thu, 13 Jun 2024 11:54:31 +0000 |
| parents | 79ea0eef1942 |
| children |
comparison
equal
deleted
inserted
replaced
| 10:79ea0eef1942 | 11:1c5a484fc06f |
|---|---|
| 1 >gnl_Orysa6.0_PACid_16878968 | |
| 2 ATG--------------------------------------------------------- | |
| 3 ------------------------------------------------------------ | |
| 4 ------------------------------------------------------------ | |
| 5 ------------------------------------------------------------ | |
| 6 ------------------------------------------------------------ | |
| 7 ------------------------------------------------------------ | |
| 8 ------------------------------------------------------------ | |
| 9 ------------------------------------------------------------ | |
| 10 ------------------------------------------------------------ | |
| 11 ------------------------------------------------------------ | |
| 12 ------------------------------------------------------------ | |
| 13 ---TCACATATGGAAGCCTTCCAAAATGTTGTGCTCCTGCATAAAGCAAATTCAAATTCT | |
| 14 ACACTAGAGGATATATCATCCCTATCTGCTGCAAGCTGTTGCAGCCTTGATCAGCTTCTA | |
| 15 GCTTGTGTCGAGGGAGAGGCACAGAAGATATTTGGTGATATCCAGAATTTGCTAGCTGAT | |
| 16 CATCGAAGCGAAGTGGCACATTTCACTCAAGAGTTGCGGGAGAGTTTCCGCATTAGCTTG | |
| 17 GATAGGACGAAGGACATGTCTAGTTTCATCCTTGGGTTGTTCGATAAGTATGTGGAGGAA | |
| 18 ACTTCGAAGTTGCAGAGCCACTCCAATCACACACATGAAGCACAAGTCAAAAGCCTTGAA | |
| 19 GATTTCCAGAAGGCTTATGAGGAGCAATCAAAATCAGAAGAACAAAAGCTTCTGGCGGAC | |
| 20 ATCACCAGTTTGGTTTCTAAACACGTTACTCGACAACGAGAACTGGTGGGTGGTAGACTA | |
| 21 AACTCTCTTGGTGACGCCGCTCGTGGAAACAAAGCATTTTTGGATGAGCACACGTCCGCC | |
| 22 ATGGAGGTGGTCACGAAGGACGCCAAGAGAAAGTGGGAAATGTTTGCAGAGCAGGCAGAG | |
| 23 AATGACTGCAAAGTTGGGTCCAACTTCTCTGCAGCTAAGCATTGTCGCATGGAAACCATT | |
| 24 CTGCAGGAATGTGCATGCACCGTCGACACTGCTGCTCAACAATGGAAAGCATCACATGCA | |
| 25 ACTGTTAACGATCTATGCAGAAAACAAATAGCTGAAGTTGAAGCACTCGTCAGGAGTGCA | |
| 26 ATCGAAACCAACGAGCAGCACGAAGCAGAGATTGCATCTTCCCGTGCCACGGCCGAGGAG | |
| 27 CATGCGTCCAACAGCAGCAAGGACCTACTCCAAGATGTTGACAATATGCTGCAGGAGGCG | |
| 28 CGCAATTCGTCGTCGAGAGTGGTGTCGACGGTGGAAGCTCATTTGGGAGAGAGCCAGCAT | |
| 29 CTACAGGAGAGCCACTCCAGCCATACCGCCGGCATCAACACCCACGCCGACAACGCTTTC | |
| 30 CAGAGCAGCTACAAGGACTACGAGCCGACCGGCGAAACTCCGGTGAGGTCGGAGCCGGAG | |
| 31 GTGCCGAGCAAAGACGCGATCGAGTCGCTGCGAGCGATGCCGATGGAGTCCCTGATGGAC | |
| 32 GAGTTCCGCGAGAACCACCCCTACGAGCCGAGC---------AAGGACCGCAGGCCATCG | |
| 33 CTCATCCCTCGCTCGCCGCTCGCCACCATCAACAAC | |
| 34 >gnl_Phoda3.0_PDK_30s1023721g001 | |
| 35 GTAAACCAAAAAATGATGAAATGTACATTAATCAAAGATCTCTATGGAGAAATTGAGCGT | |
| 36 CTAAAAGCAGAGGTGTATGCTGCTCGTGAGAAAGTTGGAGTTTACATACCAAAAGAACGC | |
| 37 TACCATCAAGAAGAGAGCGAACGGAAGGCAATGGCAGAACAAATTGAACAAATGGGGGTC | |
| 38 TTGCTCGAAAACAATCAAAAGCAAATTGAGGATCTACAAGAAAGGTATAATACTCAACTT | |
| 39 CAACAGTCTGATGACCTGAGCAAAAAGCTTGATGCCACCGAGATTCTCTGTGTTTCTCTG | |
| 40 AGCAAAAAGCTTGATGCCACCGAGAAAAGTTTGGAGCACACTAGCAAGTTATTGGCTGCT | |
| 41 GCCAGAGAAGATCTGAAGCAAGCTCAGTATACTCTGAAGGAGAAAGATTTTGTTATATCA | |
| 42 GAGCAGAGGAAAGCAGCTAGAGAAGACAAACTGAATACTGCCAACAGATCTATTGTGAAC | |
| 43 AATTTTCGGGCTGATCTTGCAACAAGGGTTGGAACACTTTGTAATACTGTTGTTGCATCC | |
| 44 TTGGATCGGCAAAATGAACACCTTCAGTCTGTTGAGAAACTATGTCAATCTAGCCTTGAT | |
| 45 TTCCATGACAAGGCAGTATCAGAGCTGAAAAGGAAAGTGTCAGCTTCAAGAGCTTTGTAT | |
| 46 ACTTCCCATATGGAAGCACTACAAAATGTAGTGCGTTTGCATAAGGCAAGCAGCAATGCC | |
| 47 AGCTTAGAAGAGATGTCATCCATGATTTCTGCCAATACCTGCTCTCTTGATCAGTTACTT | |
| 48 GCCTTGGGGCAAAGCGAAGCAGATCTGATTTTTAGTGATCTGCAAAGCATATTGTCAATT | |
| 49 CACCGAGGAGAGATTGCAAATTTCACCCGTGAACTTCGTGAGAAATTTCAAGTTAATTTG | |
| 50 GATCGGACAAAGGAGATGTCCAATTTTATTCTTGAGCTGCTTGAAAAGATAGGGAAGGGA | |
| 51 ACAAAAGAATTTCAGAATGACTCAACTTTGGTACATGAGGCTCAGGTGAAGAGCATTGGT | |
| 52 GATTTCCAAAAGGCATATGAG--------------------------------------- | |
| 53 ---------------------------------------------GTGGAAGTGAGGCTC | |
| 54 ACTGGACTGGGAGATGCTGCTCGAGATAGCAAAGCAATTATGGATAACCATGCATCATCA | |
| 55 ATGGACATCGTCACAACTGATGCTAAGAGGAAGTGGGAAGAATATTCCAAGCAGGCAGAG | |
| 56 CAAGATTCAGAGGACGGTTCTAACTTTTCAGCAGCAAAACATTGTCGCATGGAACTCATG | |
| 57 CTCCAACAGTGTGTAAACTCTGTTGATGCTACTTCTCAACAGTGGAAGAAGACACATGCA | |
| 58 TCTGTTAGTGAGATGAGCAGCAAACACGTTGCTGAAATTGAAGCACTTGTAAGGAGTGCC | |
| 59 ATTGAGAGCAATGATCAGCATGATGCTGAGGTTGCTTCAGCAAGAATGGCAGCAGAAGAG | |
| 60 GATGTAGCGAAAAATAGCAAAGATGTTCTTCAGCATTTTGATACTGTGATTGATCATGAG | |
| 61 CGCAACTCAGCCGCTGGAGTGATGGCAGCAGTCGAAGCTCACTCAGCAACCCTGCATAAA | |
| 62 CTGCAAGAGGAACAATCAAGCCAGGCAACAGAGATTAATAGCCATGCGGAGGACACATTC | |
| 63 CAAAACACCTACATGGACTATGAACCAACGGGAGAAACCCCAACAAGGTCGGAACCAGAT | |
| 64 ATACCAAGCAGGGGAACAATCGAATCTCTTCGAGCCATGCCGATAGAAGCCCTCCTTGAA | |
| 65 GAGTTCCGGGAGAACCATCCATACGAGTCC------------AAGGAGCCCAAACCGTCT | |
| 66 CTCATACCACGCTCTCCACTCGTCCAGCTCAAC--- | |
| 67 >contig_3 | |
| 68 NNT--------------------------------------------------------- | |
| 69 ------------------------------------------------------------ | |
| 70 ------------------------------------------------------------ | |
| 71 ------------------------------------------------------------ | |
| 72 ------------------------------------------------------------ | |
| 73 ------------------------------------------------------------ | |
| 74 ------------------------------------------------------------ | |
| 75 ------------------------------------------------------------ | |
| 76 ------------------------------------------------------------ | |
| 77 ------------------------------------------------------------ | |
| 78 ------------------------------------------------------------ | |
| 79 ------------------------------------------------------------ | |
| 80 ------------------------------------------------------------ | |
| 81 ------------------------------------------------------------ | |
| 82 ------------------------------------------------------------ | |
| 83 ------------------------------------------------------------ | |
| 84 ------------------------------------------------------------ | |
| 85 ------------------------------------------------------------ | |
| 86 ------------------------------------------------------------ | |
| 87 ------------------------------------------------------------ | |
| 88 ------------------------------------------------------------ | |
| 89 ------------------------------------------------------------ | |
| 90 ---------------------GTGGAT--------------------------------- | |
| 91 ---------------------------------------GAAGGAGTTGTT--------- | |
| 92 ------------------------------------------------------------ | |
| 93 ------------------------------------GTTGCTGGCTTGTCAGAGCAGGAG | |
| 94 AAGGCATCTGTTTCTGAAATTCTGACAACTGCTAGAGCTCATTCAGAAACAATTGAGAAC | |
| 95 CTTAAGAGAGATCATTCCCAGCAGGTATCCTGTATCGAACAGCACACGAATGATACTTTC | |
| 96 AGGCAAAAATACATGGATTACGAGCCTACAGGGTCCACGCCAGTTAGGAGCGAGCCGGAT | |
| 97 ATTCCCAGCAAAGGCACAATAGAGTCACTTCGTGCCATGCCTATAGATGCACTTGAAGAA | |
| 98 GAATTTCGAGAAAACCATTCATACGAATCTGCTGTTACAGGAAAGGAACTAATGCCGTCT | |
| 99 GTTACGACTCGTGCACCATTTTCACAGATCAAC--- |