Mercurial > repos > greg > plant_tribes_gene_family_aligner
diff test-data/3722.fna.aln @ 11:1c5a484fc06f draft default tip
planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/phylogenetics/plant_tribes/gene_family_aligner commit f7690d10e0515911ee00455806e457bc53f145c7-dirty
| author | greg |
|---|---|
| date | Thu, 13 Jun 2024 11:54:31 +0000 |
| parents | 79ea0eef1942 |
| children |
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--- a/test-data/3722.fna.aln Tue Sep 04 08:51:38 2018 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,819 +0,0 @@ ->gnl_Glyma1.01_PACid_16266208 ----------ATGGCTAATGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAAGAAAAGC -AATAACTTCTATTCGATCTTGGGCTTGAGCAAGGAGTGCACTGAATTGGAGCTAAAGAAT -GCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCCACCGGG------ ----AATTTAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTAT -TCT------------------GTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTG -GGAGTCTACGACAGT------------------------GATGACGACGAAAACGGCATG -GGGGACTTCTTGGACGAAATGTTAACAATGATGAGTCATACCAAATCAAATGAAAATGGA -------GAGGAGAGCTTTGAGGAGTTGCAA------------------CAGCTTTTTGAA -GACATGTTTCAAGCGGATATT------GGATTG--------------------------- ----GATGGAGGCCCTTCTCTT--------------------------------------- -------------GCTTCTTCTGATTCCTCAACTTCATCTGCT------------------ -------------------------------------TACATGACTTACAGTGAAAGTTCT -AGT---------------------------TCAAATAAACGCAATTCCTCT---GAGATG -AATTTCGGGAAG---------GCAGAGAATTCTTCTGTCTTTGATGCCAGTTAC------ -------------CAGAATTTCTGTTTTGGG---GTGAAC------CAACTCCAAGATATA -AAGAAGGGAAAG---------GGGGGAATTCTAGGAGGAGGAGGTAGAAGTAGACACAGA -AGTGGCAGAAAGCAAAAAATGTTCTAT---GGCCATGATGTT------------------ ------------------------------------------------------------- ->gnl_Glyma1.01_PACid_16266209 ----------ATGGCTAATGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAAGAAAAGC -AATAACTTCTATTCGATCTTGGGCTTGAGCAAGGAGTGCACTGAATTGGAGCTAAAGAAT -GCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCCACCGGG------ ----AATTTAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTAT -TCT------------------GTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTG -GGAGTCTACGACAGT------------------------GATGACGACGAAAACGGCATG -GGGGACTTCTTGGACGAAATGTTAACAATGATGAGTCATACCAAATCAAATGAAAATGGA -------GAGGAGAGCTTTGAGGAGTTGCAA------------------CAGCTTTTTGAA -GACATGTTTCAAGCGGATATT------GGATTG--------------------------- ----GATGGAGGCCCTTCTCTT--------------------------------------- -------------GCTTCTTCTGATTCCTCAACTTCATCTGCT------------------ -------------------------------------TACATGACTTACAGTGAAAGTTCT -AGT---------------------------TCAAATAAACGCAATTCCTCT---GAGATG -AATTTCGGGAAG---------GCAGAGAATTCTTCTGTCTTTGATGCCAGTTAC------ -------------CAGAATTTCTGTTTTGGG---ACAGGT------GAACCAACTCCAAGA -TATAAAGAAGGG------------------------AAAGGGGGGAATTCTAGGAGGAGG -AGG--------------------------------------------------------- ------------------------------------------------------------- ->gnl_Glyma1.01_PACid_16266210 ----------ATGGCTAATGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAAGAAAAGC -AATAACTTCTATTCGATCTTGGGCTTGAGCAAGGAGTGCACTGAATTGGAGCTAAAGAAT -GCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCCACCGGG------ ----AATTTAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTAT -TCT------------------GTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTG -GGAGTCTACGACAGT------------------------GATGACGACGAAAACGGCATG -GGGGACTTCTTGGACGAAATGTTAACAATGATGAGTCATACCAAATCAAATGAAAATGGA -------GAGGAGAGCTTTGAGGAGTTGCAA------------------CAGCTTTTTGAA -GACATGTTTCAAGCGGATATT------GGATTG--------------------------- ----GATGGAGGCCCTTCTCTT--------------------------------------- -------------GCTTCTTCTGATTCCTCAACTTCATCTGCT------------------ -------------------------------------TACATGACTTACAGTGAAAGTTCT -AGT---------------------------TCAAATAAACGCAATTCCTCT---GAGATG -AATTTCGGGAAG---------GCAGAGAATTCTTCTGTCTTTGATGCCAGTTAC------ -------------CAGAATTTCTGTTTTGGG---GTCGGT------CATGTAAACTATCAT -TACCAA------------------------------------------------------ ------------------------------------------------------------- ------------------------------------------------------------- ->gnl_Glyma1.01_PACid_16301083 ----------ATGGCCGATGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAACAAAAGC -AATAACTTCTATTCGATCTTGGGGTTGAAGAAGGAGTGCACTGAATTGGAGCTAAAGAAT -GCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCGACCGGG------ ----AATTCAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTAT -TCA------------------GTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTG -GGAGTCTACGACAGT------------------------GATGACGACGAGAACGGCATG -GGGGACTTCTTGGACGAAATGCTAACAATGATGAGTCAGACCAAATCGAATGAAAACGGA -------GAGGAGAGCTTTGAGGAGTTGCAA------------------CAGTTGTTTGAA -GACATGTTTGAAGCAGATATT------GGATTG--------------------------- ----GACGGAGGCCCTTCTCTT--------------------------------------- -------------GCTTCTTCTGATTGCTCAACTTCATCTGCT------------------ -------------------------------------TACATGACTTATAGTGAAAGTTCT -AGT---------------------------TCAAATAAACACAATTCCTCT---GAGATG -AATTTCGGGAAG---------GCAGAGAATTCTTCTGTCTTTGATGCTGGTTAC------ -------------CAGAATTTCTGTTTTGGG---GTGAAC------CAACTCCAAGATATA -AAGAAGAAAAAG---------GGGGGAATTCTA---GGAGGAGGTAGAAGTAGACACAGA -AATGGCAGAAAGCAAAATATGTCCTAT---GGCCATGATGTTTCATCGAATGACTACCCT -GGAATTTCCACAAAG--------------------------------------------- ->gnl_Glyma1.01_PACid_16301085 ----------ATGGCCGATGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAACAAAAGC -AATAACTTCTATTCGATCTTGGGGTTGAAGAAGGAGTGCACTGAATTGGAGCTAAAGAAT -GCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCGACCGGG------ ----AATTCAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTAT -TCA------------------GTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTG -GGAGTCTACGACAGT------------------------GATGACGACGAGAACGGCATG -GGGGACTTCTTGGACGAAATGCTAACAATGATGAGTCAGACCAAATCGAATGAAAACGGA -------GAGGAGAGCTTTGAGGAGTTGCAA------------------CAGTTGTTTGAA -GACATGTTTGAAGCAGATATT------GGATTG--------------------------- ----GACGGAGGCCCTTCTCTT--------------------------------------- -------------GCTTCTTCTGATTGCTCAACTTCATCTGCT------------------ -------------------------------------TACATGACTTATAGTGAAAGTTCT -AGT---------------------------TCAAATAAACACAATTCCTCT---GAGATG -AATTTCGGGAAG---------GCAGAGAATTCTTCTGTCTTTGATGCTGGTTAC------ -------------CAGAATTTCTGTTTTGGG---GTAGGT------CATGTAAACTATCAT -TACCAA------------------------------------------------------ ------------------------------------------------------------- ------------------------------------------------------------- ->gnl_Glyma1.01_PACid_16301084 ----------ATGGCCGATGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAACAAAAGC -AATAACTTCTATTCGATCTTGGGGTTGAAGAAGGAGTGCACTGAATTGGAGCTAAAGAAT -GCTTATAGGAAACTTGCAAAGAAATGGCACCCAGATCGTTGTTCAGCGACCGGG------ ----AATTCAGAGTTAGTGGAAGAAGCTAAGAAAAAATTTCAGGAAATTCGGGAAGCCTAT -TCA------------------GTTTTATCTGACGCCAACAAAAGGTTAATGTACGACGTG -GGAGTCTACGACAGT------------------------GATGACGACGAGAACGGCATG -GGGGACTTCTTGGACGAAATGCTAACAATGATGAGTCAGACCAAATCGAATGAAAACGGA -------GAGGAGAGCTTTGAGGAGTTGCAA------------------CAGTTGTTTGAA -GACATGTTTGAAGCAGATATT------GGATTG--------------------------- ----GACGGAGGCCCTTCTCTT--------------------------------------- -------------GCTTCTTCTGATTGCTCAACTTCATCTGCT------------------ -------------------------------------TACATGACTTATAGTGAAAGTTCT -AGT---------------------------TCAAATAAACACAATTCCTCT---GAGATG -AATTTCGGGAAG---------GCAGAGAATTCTTCTGTCTTTGATGCTGGTTAC------ -------------CAGAATTTCTGTTTTGGG---ACAGGT------GAACCAACTCCAAGA -TATAAAGAAGAA------------------------AAAGGGGGGAATTCTAGGAGGAGG ------------------------------------------------------------- ------------------------------------------------------------- ->gnl_Medtr3.5_Medtr8g022310.1 ----------ATGGCTAACGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAACAAAAGC -AATGATTTCTATGCAGTTTTGGGATTGAATAAGGAATGCTCTGATTCAGAGCTAAGGAAT -GCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCTTCAGGG------ ----AATGTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTAT -TCT------------------GTTTTATCTGACTCGAACAAGAGATTAATGTACGACGTT -GGAGTTTACGACAGT------------------------GATGATGACGAAAATGGTATG -GGAGACTTTCTGAATGAAATGGTTACAATGATGAGCCAAACTAAATCAAATGAAAATGGA -------GAGGAGAGCTTCGAGGAGTTACAA------------------CAGTTGTTTGAT -GATATGTTTCAAGCGGATATC------GGATTA--------------------------- ----AATGGAAGCACCTCTCTT--------------------------------------- -------------AATGCTTCGGGTTGCTCCACTTCATCGACT------------------ -------------------------------------TTCATGACGTTCAGTGAAAGCTCG -AAT---------------------------TCAAATAAGCGCAATTCCACT---CAAATG -AATTTTGGGAAG---------GCAGAGGATTCTTCTAGTTTTGGTGCAAATTAC------ -------------CAGAACTTCTGTTTTGGG---ATGAAG------CACCTTCAAGAAGAT -GTGGAGAAGGAA------AAAGGGGGAATTCTAGAAGGAGGAGGTAGCAAAAAACAAAGA -AAAGGAAGAAAACAAAAAATTTCATGT---GGACAT---GTTTCCTCTAATGACCATCCT -GGTATTTCTGCTAAT--------------------------------------------- ->gnl_Medtr3.5_Medtr8g022310.2 ----------ATGGCTAACGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAACAAAAGC -AATGATTTCTATGCAGTTTTGGGATTGAATAAGGAATGCTCTGATTCAGAGCTAAGGAAT -GCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCTTCAGGG------ ----AATGTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTAT -TCT------------------GTTTTATCTGACTCGAACAAGAGATTAATGTACGACGTT -GGAGTTTACGACAGT------------------------GATGATGACGAAAATGGTATG -GGAGACTTTCTGAATGAAATGGTTACAATGATGAGCCAAACTAAATCAAATGAAAATGGA -------GAGGAGAGCTTCGAGGAGTTACAA------------------CAGTTGTTTGAT -GATATGTTTCAAGCGGATATC------GGATTA--------------------------- ----AATGGAAGCACCTCTCTT--------------------------------------- -------------AATGCTTCGGGTTGCTCCACTTCATCGACT------------------ -------------------------------------TTCATGACGTTCAGTGAAAGCTCG -AAT---------------------------TCAAATAAGCGCAATTCCACT---CAAATG -AATTTTGGGAAG---------GCAGAGGATTCTTCTAGTTTTGGTGCAAATTAC------ -------------CAGAACTTCTGTTTTGGG---GTCAAT------CTTGTAAATTATCAT -TACCAA------------------------------------------------------ ------------------------------------------------------------- ------------------------------------------------------------- ->gnl_Musac1.0_GSMUA_Achr6T31040_001 ----------ATGGCGGCCGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GAGGACAAAAGC -GGCGACTTCTACGCCGTGTTGGGGCTCAGGAAGGAGTGCTCCGAAACCGAGCTGAGGAAT -GCGTACAAGAAGCTTGCCATGAGGTGGCATCCGGATAAGTGCTTGGCTTCGGGA------ ----AATGCTCAAATCGTGGGGGAAGCCAAGGAGAAGTTTCAGGAGATCCAGAAAGCCTAC -TCT------------------GTTCTCTCAGACTCCAATAAGAGATTCCTGTACGATGTG -GGAGTCTACGACAACGAT------------------GATGACAATGACGAAAACGGTATG -GGAGACTTTATAGGGGAGATGTTGGAGATGATGAGCCAAACGAAACCCAATGAGAACAGC -------CAAGATAGCTTCCAGGAGCTGCAG------------------GAGCTGTTTGTG -GAGATGTTCCAGGACGACCTG------GATGCCGGA------------------------ ----TTTGGTGGTTCCATCTTCCAC---GATTGCCCCTGGGCTCAACCG------------ ----------ACCAATGGCCAAGATTGCTGGACTTCATCGGGA------------------ -------------------------------------CTGCACTTTGCTAATGGAAGGAGT -AAG------------------------TGTGGCAACAAGCGGGGCAACTCA---GCTGTG -AACTTGGGAAAG------------GTCAATCTTGAAGAGTTGGAACATGGTACC------ -------------AGCGACTTCTATTTTGGG---CTAAAT------GATGCAGCACAGCCA -TCACAAGGGAAAGGAGGCAGT------------------------AATAACAAGAGAAGG -AATGGAAGAAAGCAAAAGGTTTCATCC---AATCATGATGTCTCATCC------------ ------------------------------------------------------------- ->gnl_Musac1.0_GSMUA_Achr9T18140_001 ----------ATGGCCGCCGGG--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GAGGAAAAGATC -GGCGATTTCTACACGGTGCTGGGGCTCAGGAAGGAGTGCTCGGAGGCGGAGCTGAGGATC -GCGTACAAGAAGCTGGCTATGAGATGGCATCCGGATAAGTGCTCGGCTTCGGGA------ ----AACCATCGAAGGATGGAGGAAGCGAAGGAGAAGTTCCAGGAAATCCAAAAAGCCTAC -TCT------------------GTTCTCTCGGACTCCAGCAAGAGATTTCTGTATGATGTG -GGAATCTACGATAACGAG------------------GATGATAATGACGAAAAAGGAATG -GGGGATTTTATTGGGGAGATAGCTCAGATGATGAGCCAAACGAAATCTGGGGAGAATGGT -------CATGATAGCTTTGAGGAGCTGCAG------------------CGGATGTTCCTG -GATATGTTCCAGGACGACCTG------GACGCCGGA------------------------ ----TTCGGTGATTCTTCCATCCAC---AGTGGCCCCCAAGCTCGGCCA------------ ----------ACCGACGGTCTCAATTGCTCGATGCCATCAGGA------------------ -------------------------------------CTGCAGTTTGCTGATGGAGGGAAC -AAT------------------------GGCAGCAACAAGAGAGGCAACTCG---GAGAAG -------------------------GCAAAGCTGGATGGGTTGGAAAACAGTTCC------ -------------ACTGGCTTCTGCTTCGGG---TTGAAT------GATGCAGGGCAGTCA -TCAAAAGGAAAAGGAAGCGCT------------------------AATAGCAAGAGAAGG -AATGGAAGAAAGCAGAAGGTCTCATCC---AAACATGATGTCTCATCCAGTGAT---GCT -GAGGTCTCATTT------------------------------------------------ ->gnl_Musac1.0_GSMUA_Achr8T23700_001 ----------ATGGCGAGCGAC--------------------------------------- ------------------------------------------------------------- -------------------------------------------------ATGGATGCAAGC -GGCGATTTCTACTCGGTGCTGGGGCTGAAGAAGGAGTGCTCCGAGGCGGAGCTCAGGAAT -GCGTACAAGAAGCTCGCTTTGAAGTGGCATCCCGATAAGTGCTCGGCGTCGGGT------ ----AATGAGATTCGCATGAAGGAAGCGAAGCAGCAGTTCCAGGAGATCCAGAAAGCCTAC -TCT------------------GTTCTCTCCGACTCCAACAAGAGATTTCTGTACGATGTT -GGAGCCTACGACAAAGAC------------------GACGACAAAGACGAAGAGGGGATG -GTGGAGTTTCTTGGGGAGATGGCGCAAATGATGAGGCAAACCAAATGCTGTGGGAGCGGC -------CAGGAGAGCTTCGAGCAGCTGCAG------------------CAGATGTTCGTG -GAGATGTTCCACGACGATCTG------GACGCGGGA------------------------ ----TTC------------------------------------------------------ -------------------------TGCGGCCACTCCTCGGCC------------------ ----------------------------------------------ACCTCGGGCGCGGCG -TCC------------------------TGCGGCAACAAACGGGACAACTCG---GCGATG -GACTCGGGCAAG------------CGGAAGCCGGACGAGTTGGACCCGGCCGCC------ -------------ATTGGGTTCTGCCTCGGG---ACAAAG------GATGCAGGGCAATCC -TCAAAAGGAAGAGGTAGC---------------------------AACAGCAAGAGAAGG -AACAGAAGAAAGCAAAAGGCATCATCC---AAGCATGACAACTCATCTCACAAT---GCT -AAGGTCTCAGCT------------------------------------------------ ->gnl_Musac1.0_GSMUA_AchrUn_randomT02210_001 ----------ATGGAGGGGGAC--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GAGGAGAAGAGC -GGGGATTTCTACGCGGTGCTGGGGCTGAAGAAAGAGGGCTCCATGGCGGAGCTCAAGAAT -GCGTACAAGAAGCTGGCGATGAAGTGGCATCCCGATAAGTGTCCTGCGTCAGGC------ ----AATAAGATACGCATGGATAAAGCGAAGGAGAAGTTCCAGGAGATCCAAAAAGCCTAC -TCT------------------GTTCTCTCCGACTCCAACAAGCGATTCCTGTACGATGTC -GGAGTTTACGACAAAGAC------------------GATGAGGAAGATGAAGAGGGGATG -GGGGACTTCATTGGGGAGATCGCGCAAATGATGAGCCAGTCCAAACCCAGCGGGAGCGGC -------CACGAGAGCTTGGAGGAGCTGCAT------------------CGGCAGGTCGTG -GAGATGTTCCTCGACGAACTG------GACGCCGGAGAT--------------------- -CGCTTCTCCTCGGCCAACCAA--------------------------------------- -------------GGCGCGTCGTCCTGCGACGGCAGGGACGAC------------------ ------------------------------------------------------------- -------------------------GGCGGCGGTAACAAGCGTGGCAACTGG---GCGGTG -GACTGGGGCAAG------------GAGAAGCTGAACGAGTTGGGCCCGGGCACC------ -------------GGCGGGTTCTGCTTCGGG---GTGAGT--------------------- ----------------------------------------------------CGCCGAGTC -CACTCCTTTGATCTTATGATAGACGTA---GTCCACCTCATCCATTCTGATCTG------ ----------------------------------------------------ACTCTGGAA ->gnl_Orysa6.0_PACid_16843526 ----------ATGGCCGACGGGGGA------------------------------------ ------------------------------------------------------------- ----------------GAGAAGTGC---CGGGACGCGGCCGGC---GAGGGCGGCGGCGGC -GGCGACCTGTACGCCGTGCTCGGGCTCAAGAAGGAGTGCTCCGACGCCGACCTCAAGCTC -GCGTACCGGAAGCTCGCCATGAGATGGCATCCGGACAAATGCTCATCCTCCAGC------ ----AGTGCAAAGCACATGGAGGAAGCCAAGGAGAAGTTCCAGGAGATCCAGGGCGCCTAT -TCC------------------GTCCTCTCAGACTCAAACAAGCGGTTCCTCTACGACGTG -GGGGTATATGATGATGACGAC------------AATGACGATGACAACCTGCAGGGGATG -GGGGACTTCATTGGTGAGATGGCCCAGATGATGAGCCAGGCACGGCCAACGAGG------ -------CAGGAGAGCTTTAAAGAACTGCAG------------------CAGCTATTCGTA -GACATGTTCCAAGCTGATCTT------GATTCGGGT------------------------ ----TTCTGCAATGGACCCTCAAAGTGCTACCATACCCAGGCCCAAAGCCAGACTCGAACA -TCCTCAACCTCCCCTTCGATGTCACCGTCTCCACCGCCTCCA------------------ -------------------------------------GTAGCTACTGAGGCAGAATCGCCA -TCA------------------TGTAATGGTATTAATAAGCGTGGTTCATCA---GCAATG -GACTCTGGGAAG---CCTCCAAGAGCCAGCGAAGTCGGTTCTGGACAGAGTCAA------ -------------TCAGGGTTTTGTTTCGGG---AAGAGT------GATGCTAAACAAGCG -GCGAAGACGCGAAGCGGGAACACG---------------------GCCAGCCGGAGGAGG -AACGGCCGGAAGCAGAAGGTGTCGTCG---AAGCACGACGTCTCGTCTGAGGACGAGATG -CCAGGTTCGCAGTGG---------------------------------CACGGCGTGGCC ->gnl_Orysa6.0_PACid_16843528 ----------ATGGCCGACGGGGGA------------------------------------ ------------------------------------------------------------- ----------------GAGAAGTGC---CGGGACGCGGCCGGC---GAGGGCGGCGGCGGC -GGCGACCTGTACGCCGTGCTCGGGCTCAAGAAGGAGTGCTCCGACGCCGACCTCAAGCTC -GCGTACCGGAAGCTCGCCATGAGATGGCATCCGGACAAATGCTCATCCTCCAGC------ ----AGTGCAAAGCACATGGAGGAAGCCAAGGAGAAGTTCCAGGAGATCCAGGGCGCCTAT -TCC------------------GTCCTCTCAGACTCAAACAAGCGGTTCCTCTACGACGTG -GGGGTATATGATGATGACGAC------------AATGACGATGACAACCTGCAGGGGATG -GGGGACTTCATTGGTGAGATGGCCCAGATGATGAGCCAGGCACGGCCAACGAGG------ -------CAGGAGAGCTTTAAAGAACTGCAG------------------CAGCTATTCGTA -GACATGTTCCAAGCTGATCTT------GATTCGGGT------------------------ ----TTCTGCAATGGACCCTCAAAGTGCTACCATACCCAGGCCCAAAGCCAGACTCGAACA -TCCTCAACCTCCCCTTCGATGTCACCGTCTCCACCGCCTCCA------------------ -------------------------------------GTAGCTACTGAGGCAGAATCGCCA -TCA------------------TGTAATGGTATTAATAAGCGTGGTTCATCA---GCAATG -GACTCTGGGAAG---CCTCCAAGAGCCAGCGAAGTCGGTTCTGGACAGAGTCAA------ -------------TCAGGGTTTTGTTTCGGGCAGAAGAGT------GATGCTAAACAAGCG -GCGAAGACGCGAAGCGGGAACACG---------------------GCCAGCCGGAGGAGG -AACGGCCGGAAGCAGAAGGTGTCGTCG---AAGCACGACGTCTCGTCTGAGGACGAGATG -CCAGGTTCGCAGTGG---------------------------------CACGGCGTGGCC ->gnl_Poptr2.2_PACid_18217800 ----------ATGGCAAACGGAGGAGAA--------------------------------- ------------------------------------------------------------- ----------------------------------------------GATAAATGGAAAAGC -AATGACTTATATCAAGTCTTGGGGTTGAATAAGGAATGCACTGATACAGAGCTCAGGAGT -GCTTATAAGAAACTTGCACTGAGATGGCATCCAGATCGATGTTCAGCTTCAGGA------ ----AATTCTAAGTTCGTTGAAGAAGCCAAAAAGAAGTTTCAGGCAATTCAACAGGCCTAT -TCT------------------GTTCTTTCTGACACCAACAAGAGGTTTCTTTACGACGTT -GGTGTTGATGACAGT------------------------GATGACGACGAAAATGGAATG -GGTGATTTTCTGAATGAAATGGCTGTCATGATGAGCCAAACGAAGCCTAGCGAAAACATG -------GAGGAGAGCCTAGAGGAACTGCAA------------------GAATTATTTGAC -GAGATGTTCCAAGAGGATCTG------CATTCG--------------------------- ----TTTGGGATTGACAGTCAG--------------------------------------- -------------GCTGCTCCTTCATGT------CCTCCTTCT------------------ -------------------------------------TATGTATCCTACAGCGAAAGTTCC -AAC------------------------TCAAATAACAAACGTGTTTCTGCT---GATATG -AACTTGGGGAAG---ACTAAAGTGGATGATTCTTCTAGCTTCAACTCTCACTTT------ -------------GAGAAATTCTGTTTAGGG---ACA------------------------ ----------GGTGGAACAGCAGCAACCTTTCAAGAAGGTGAAGGTGGGAGTAAGAGGAGG -AATTCAAGGAGGAGCCAGCGGCAGACG---AAGGCAAGACAAGAAACAAAGAGTTTCTTC -GGGCTA------------------------------------------------------ ->gnl_Poptr2.2_PACid_18234651 ----------ATGGAAAATGGAGGAGAA--------------------------------- ------------------------------------------------------------- ----------------------------------------------GAGAAAGGGAAAAGC -AATGACTTTTATCAGGTTTTGGGGTTGAATAAGGATTGCACTGCCACAGAGCTGAGGAAT -GCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGATGTTCAGCTTCGGAA------ ----AATTCCAGGTTCGTTGACGAAGCCAAAAAGAAGTTTCAGACAATTCAACAGGCCTAT -TCT------------------GTTCTTTCTGACACCAACAAGAGGTTTCTTTACGACGTT -GGTGTTTATGACAGT------------------------GAAGACGACGAAAATGGAATG -GGCGGATTTATGAATGAAATGGCTGCTATGATGAGCCAAACAAAGCCCCACGAAAACGTG -------GAGGAGAGCTTTGAGGAATTGCAA------------------GGATTGTTTGAG -GAGATGTTCCAAGAGGATTTG------GATTCG--------------------------- ----TTTGGGATTGCCTGTCAG--------------------------------------- -------------GCTACTACC--------------------------------------- -------------------------------------TGTGTGTCATACAGCGAAAGCTCC -AAC------------------------TCAAATGATAAACGTGTTTCTGTC---GATATG -AACTTGAAGAAG---ACAAAGGTGGATGATTCTTCTGGCTTCAATTCTCACGTC------ -------------GAGAAGTTCTGTTTAGGG---GTA------------------------ ----------AGTGGAACACCAGCAATCTTTCAAGAAGGGGAA---GGGAGTAAGAGGAGG -AGTTCAAGGAGGAACCGGCGG--------------------------------------- ------------------------------------------------------------- ->gnl_Poptr2.2_PACid_18234649 -ATGCTAAGAATGGAAAATGGAGGAGAA--------------------------------- ------------------------------------------------------------- ----------------------------------------------GAGAAAGGGAAAAGC -AATGACTTTTATCAGGTTTTGGGGTTGAATAAGGATTGCACTGCCACAGAGCTGAGGAAT -GCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGATGTTCAGCTTCGGAA------ ----AATTCCAGGTTCGTTGACGAAGCCAAAAAGAAGTTTCAGACAATTCAACAGGCCTAT -TCT------------------GTTCTTTCTGACACCAACAAGAGGTTTCTTTACGACGTT -GGTGTTTATGACAGT------------------------GAAGACGACGAAAATGGAATG -GGCGGATTTATGAATGAAATGGCTGCTATGATGAGCCAAACAAAGCCCCACGAAAACGTG -------GAGGAGAGCTTTGAGGAATTGCAA------------------GGATTGTTTGAG -GAGATGTTCCAAGAGGATTTG------GATTCG--------------------------- ----TTTGGGATTGCCTGTCAG--------------------------------------- -------------GCTACTACC--------------------------------------- -------------------------------------TGTGTGTCATACAGCGAAAGCTCC -AAC------------------------TCAAATGATAAACGTGTTTCTGTC---GATATG -AACTTGAAGAAG---ACAAAGGTGGATGATTCTTCTGGCTTCAATTCTCACGTC------ -------------GAGAAGTTCTGTTTAGGG---GTGGAA------CACCAGCAATCTTTC -AAGAAGGGGAAGGGAGTAAGAGGAGGAGTTCAAGGAGGAACC---GGCGGTAGAGAGAGG -AAAGGCAGGAAACAAGAAGTTTCATCT---GGCTATGATGTCTCCTCCCATGAC---CAT -GGTATTTCTGCTTCA--------------------------------------------- ->gnl_Poptr2.2_PACid_18234650 ----------ATGGAAAATGGAGGAGAA--------------------------------- ------------------------------------------------------------- ----------------------------------------------GAGAAAGGGAAAAGC -AATGACTTTTATCAGGTTTTGGGGTTGAATAAGGATTGCACTGCCACAGAGCTGAGGAAT -GCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGATGTTCAGCTTCGGAA------ ----AATTCCAGGTTCGTTGACGAAGCCAAAAAGAAGTTTCAGACAATTCAACAGGCCTAT -TCT------------------GTTCTTTCTGACACCAACAAGAGGTTTCTTTACGACGTT -GGTGTTTATGACAGT------------------------GAAGACGACGAAAATGGAATG -GGCGGATTTATGAATGAAATGGCTGCTATGATGAGCCAAACAAAGCCCCACGAAAACGTG -------GAGGAGAGCTTTGAGGAATTGCAA------------------GGATTGTTTGAG -GAGATGTTCCAAGAGGATTTG------GATTCG--------------------------- ----TTTGGGATTGCCTGTCAG--------------------------------------- -------------GCTACTACC--------------------------------------- -------------------------------------TGTGTGTCATACAGCGAAAGCTCC -AAC------------------------TCAAATGATAAACGTGTTTCTGTC---GATATG -AACTTGAAGAAG---ACAAAGGTGGATGATTCTTCTGGCTTCAATTCTCACGTC------ -------------GAGAAGTTCTGTTTAGGG---GTGGAA------CACCAGCAATCTTTC -AAGAAGGGGAAGGGAGTAAGAGGAGGAGTTCAAGGAGGAACC---GGCGGTAGAGAGAGG -AAAGGCAGGAAACAAGAAGTTTCATCT---GGCTATGATGTCTCCTCCCATGAC---CAT -GGTATTTCTGCTTCA--------------------------------------------- ->gnl_Soltu3.4_PGSC0003DMP400016105 ----------ATG------------------------------------------------ ------------------------------------------------------------- ----------------------------------------------------------GGC -AATGATTATTATGCAGTTTTGGGATTGAAAAAGGAATGCACTGAAACAGAGCTTAGGAAT -GCTTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTTCAGCATCGGGG------ ----AATTCGAAGTTTGTAGATGAAGCAAAGAAGAAATTTCAGGCAATTCAAGAAGCATAT -TCT------------------GTGTTATCGGATGCAAACAAAAGGTTTCTGTACGATGTA -GGAGTTTATGACTCTGGT------------------GATGATGACGACGAAAATGGCATG -GGTGATTTCCTGAATGAAATGGCAGCTATGATGAGCCAAAATAAGTCCAATGAAAATCAG -------GAAGAAACCTTTGAGGAATTGCAG------------------GATATGTTTGAC -GAAATTTTCAATAGTGATAAT------GGGATG--------------------------- ----------TCTTCTTCTTCT--------------------------------------- -------------TCTTCTTCTTCTCGGACTGGAACTCCTTCA------------------ -------------------------------------ATGTGTTCTACTACATCGTCTACA -TCTTCCAGTGAGACC---TTTTTTACCTTTTCCAACAAAAGAAGTTCAGGT---GAAATG -AAGTCGGGTAAA------------------------GGCGATTCTTGCCAATTC------ -------------CAAGGATTTTGTGAAGGG---ACA------------------------ ----------GGTGGAGCATCTGGAAAAAGCAATGAAAGAGAA---CGGAGTCGGAGGAAA -AATTCCAAGAGTGGACGGAAGCAA------------------------------------ ------------------------------------------------------------- ->gnl_Soltu3.4_PGSC0003DMP400016106 ----------ATG------------------------------------------------ ------------------------------------------------------------- ----------------------------------------------------------GGC -AATGATTATTATGCAGTTTTGGGATTGAAAAAGGAATGCACTGAAACAGAGCTTAGGAAT -GCTTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTTCAGCATCGGGG------ ----AATTCGAAGTTTGTAGATGAAGCAAAGAAGAAATTTCAGGCAATTCAAGAAGCATAT -TCT------------------GTGTTATCGGATGCAAACAAAAGGTTTCTGTACGATGTA -GGAGTTTATGACTCTGGT------------------GATGATGACGACGAAAATGGCATG -GGTGATTTCCTGAATGAAATGGCAGCTATGATGAGCCAAAATAAGTCCAATGAAAATCAG -------GAAGAAACCTTTGAGGAATTGCAG------------------GATATGTTTGAC -GAAATTTTCAATAGTGATAAT------GGGATG--------------------------- ----------TCTTCTTCTTCT--------------------------------------- -------------TCTTCTTCTTCTCGGACTGGAACTCCTTCA------------------ -------------------------------------ATGTGTTCTACTACATCGTCTACA -TCTTCCAGTGAGACC---TTTTTTACCTTTTCCAACAAAAGAAGTTCAGGT---GAAATG -AAGTCGGGTAAA------------------------GGCGATTCTTGCCAATTC------ -------------CAAGGATTTTGTGAAGGG---GTGGAG------CATCTGGAAAAAGCA -ATGAAAGAGAACGGAGTCGGAGGAAAAATTCCAAGAGTGGAC---GGAAGCAATAGGATG -GATGCTAAAAGGCAAAAGGTTCTATCA--------------------------------- ------------------------------------------------------------- ->gnl_Ambtr1.0.27_AmTr_v1.0_scaffold00007.329 ----------ATGGCACCCCGA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAGAGAAAGAC -AGTGATTTTTATGCAATTTTAGGGTTGAAGAAGGAGTGCTCTGCTTCAGATCTCAGAAAT -GCGTACAAAAGGCTCGCACTTCGGTGGCATCCAGATAGGTGCTCTGCCTCAGGG------ ----AACACAAAGTTTGTGGAGGAATGCAAGAAAAAGTTCCAGGCCATTCAGCAGGCTTAT -TCC------------------GTGCTCTCGGATGCAAATAAGAGGTTTTTGTACGATGTT -GGAGCATATGGAAGT------------------------GACGATGACGATCAGGGAATG -GGTGAATTTCTTGGGGAGATGGCGGTAATGATGAGCCAGACAAAGCCCAGTGAAAAAGGG -------CCGGAGAGCTTTGAGGATCTACAG------------------AACTTGTTTCAG -GAGATGTTCGAAAGGGATCTG------GACATG--------------------------- ----TTTAAGTCATCGACCTCCCAC------------------------------------ -------------AACAACAACAATGATAACAACAATAATAAT------------------ -------------------------------------CATAGGAGTAGTGACAATAATAAT -TGTAGTAGTGTTCAT---TGTTTTAGTAACACCAACAAGAGGAATTGCTCG---GATATG -AATGCCGGAGAA---GCCTCGGAGGTCGGGCGCTTTGCTTTCTCATGCTATGCGACAGAG -TTCCTGCACAAGCAAACTTTCTCCGTCGGG---GCGGAT------------------GAT -GTGCGATCGGAGTCG------------------------------AGCAACAAGAGACGA -AACGGGAGGAAACAGAAATCCACCTCC---TCTTCAAGGAAAAGT--------------- ------------------------------------------------------------- ->gnl_Aquco1.0_PACid_18141277 ----------ATGGCTAGT------------------------------------------ ------------------------------------------------------------- -------------------------------------------------GAAGAAGAAGCA -AGTGATTTCTATAAAGTTTTGGGATTGAAAAATAACTGTTCTTCCTTGGAGCTCAGGAAC -GCTTATAAGAAGCTTGCACTGAAATGGCATCCGGATCGTTGTGCTGCTTCAGGA------ ----AACTCAAAGTTTGTTGAAGAAGCAAAGAAGAATTTTCAAGCAATACAAGAAGCTTAT -TCT------------------GTTCTTTCAGATGAGCAGAAACGATTTATGTATGACGTT -GGTGTCTACGATAAAGAT------------------GATGATGACGAAAATGAAGATATG -GGCGATTTTTTAGGTGAAATGATGTCTATGATGAAGCAAGAAAATACTAGTGCGGATGGA -------CAACAAAGTTTTGAAGACCTTCAA------------------AACCTATTCCAG -GAAATGGTTCAAAATGACAAA------GAATTT--------------------------- ----TATAATCCAGCCTCTCAA--------------------------------------- -------------AACTCGTCGATATATAATGCTAGTAACAACATGTTCTCCTTCTCTAAT -AACGAGAACTTAAACAATGCTAGCAACAACACATTCTCCTCTTTTTATAATGAGAACCTA -AAC------------------------AGCAGCAACAAGAAAAGTTGCTCA---AGTATG -AGCGCAGAAAAT------ACCAAGGTGGACTTTAACATGGAATCATTGGACTTC------ -------------CGCAGCTTTTCTATTGGG---TTAGAA------GGCGGTACATCATTT -CAAAACTCCAAAGGGAGAGGA------------------------GTAACGGGTAGGCGG -ACAGGAAGGAAACAGAAGGGGTCGTCC---TGTAATGATATGTCTTCCCATGAT---TCT -AAGATTTTGGCG------------------------------------------------ ->gnl_Arath10_AT3G14200.1 ----------ATGGCGTCCAGTAAT------------------------------------ ------------------------------------------------------------- ----------------------------------------------AGCGAGAAGATCAAC -GAGAATCTGTACGCTGTTCTGGGTTTGAAGAAGGAATGTTCTAAGACGGAGCTCCGTTCT -GCTTATAAGAAGCTTGCTCTCAGATGGCATCCAGATCGTTGTTCGTCA------------ -------ATGGAGTTTGTAGAAGAAGCAAAGAAGAAATTTCAGGCAATCCAAGAAGCCTAC -TCT------------------GTTCTGTCTGACTCCAACAAGAGGTTCCTGTATGATGTT -GGTGCTTATAATACTGAT------------------GATGATGATGACCAAAACGGAATG -GGAGATTTCTTGAACGAAATGGCGACTATGATGAATCAATCCAAGCCTAGTGATAATAAC ----ACAGGGGACAGTTTTGAACAACTACAA------------------GATCTGTTTAAT -GAGATGTTTCAAGGAGACGCT------GCAGCA--------------------------- ----TTCCCATCATCA--------------------------------------------- -------------------TCGTCCTGCTCCACTTCAAATTTC------------------ -------------------------------------ACTTCATCTCGTAGTTTTGTATTC -GAT------------------------ACAAATTCTCAGCGGTCATCTTCGTTTGCGACA -AGTTCGATGGGG------ATGAATAATGATCCTTTCGGATATGACCCGAGAGCT------ -------------CATTCCTTCTCTTTAGGG---GTGGAC------CATCAGCAAGAGTTC -AAGAAAGGGAAAAAC------------------------------AATGGCGGAAGAAGA -AACAGGAGAAAGAACAATGTTCCATCGGCTGGTCACGAAACGTCGTCGTCAAACAACTAT -GGAGTCCCCACCTCA--------------------------------------------- ->gnl_Bradi1.2_Bradi3g60090.1 ----------ATGGCCACCGGGGGC------------------------------------ ------------------------------------------------------------- ----------------GACAAGTGCGGCGGAAAGCCGGCGGCC---GCGGGGGTGGGCGGC -GGTGACCTGTACTCTGTGCTGGGCGTCAACAAGGAGTGCTCCGACGCCGACCTCAAGGTC -GCCTACCGGAAGCTCGCCATGAGATGGCATCCGGATAGATGCTCCTCCTCCAGC------ ----AGCACCAAGCACATGGAGGAAGCAAAAGAGAAGTTCCAGGAGATCCAGGGCGCCTAT -TCC------------------GTCCTCTCCGATGCCAACAAGCGCTTCCTCTATGACGTG -GGGGTATATGAAGAACATGAAGAA---------GAAGATGATGACACTCTGCAGGGGATG -GGGGACTTCCTTGGTGAGATGGCCCATATGATGAGCCAGACGCAGCCAGCGAGA------ -------CAGGAAAGCTTTGAGGAGCTCCAG------------------CAGCTCTTCGTG -GACATGTTCCAGTCTGATATT------GAATCGGGA------------------------ ----TTCTGCAACGGACCTGCCAAG---GACCATGACCCAGTCCAAAGACAGACGCGAACA -TTCTCGACCCCTCCTTCGCCATCGCCATCTCCACCGCCTCCA------------------ -------------------------------------CTAGCTACAGTGGACGAAGCGGCA -TCA------------------TGTAATGGCATCAATAAGCGTGGCTCATCA---GCAATG -GGCTCTGGGAAG---CCTCCAAGAGCTGGTGAAGTGAGTGGGGGTCACGGCCAG------ -------------TCTGAGTTCTGTTTCGGG---ATGAGC------GACGCCAAGCAAGCG -CCGAAGGCGCGAGGCGGGAAC------------------------GCTAGCAGGAGAAGG -AACGGCCAGAAGCAGAAACTGTCGTCG---AAGCACGACGTCTCCTCCGGCGATGAGATG -CCGAGACCA---------------------------------------CATGCAGCAGTA ->gnl_Carpa1.181_PACid_16420351 ----------ATGGCGGATGGA--------------------------------------- ------------------------------------------------------------- ----------------------------------------------GAAGACAAGAACAAC -AGTGATTTGTATGCGGTTCTTGGATTGAATAAGGAATGTACTCCAGCAGAGCTCAGGAAC -GCTTATAAGAAACTTGCAATGAGATGGCATCCAGATCGCTGTTCCGCGTCGGGG------ ----AATTCAATGTTTGTGGAAGAAGCAAAGAAGAAATTTCAGGCAATCCAAGAAGCCTAC -TCT------------------GTTCTTTCTGACGCAAACAAGAGGTTTCTGTACGACGTC -GGAGCTTACGAAAGT------------------------GATGACGACGAAAATGGAATG -GGTGATTTTTTAAACGAAATGGCAGCCATGATGAGCCAAACAAAGCCTAATGAGAATGGG -AATGCACAAGAGAGCTTTGAAGAATTGCAA------------------GAGTTGTTTCAA -GAGATGTTTCAAGGGGATATGGGATTCAACACA--------------------------- ----TTTGGATCTAGTTCTCAGCCT------------------------------------ -------------ACTACTTCTTCGTGTTCTGCTTCCTCTGCA------------------ -------------------------------------TATGCAACCTGTAGCGAAACCTCC -AAT---------------------CCTAACAACAACAAGCGCAATTCATCA---GAAATG -AATTATGGCAAG---AAAAAGGTAGATGATTCTTCAGGGTTTCATGCTCATTTC------ -------------CAAACCTTTTGTTTAGGG---GTGGAA------CAGCAGCAAGATTTC -AAGAAGGGGAAGGAAGCAAGAGGAGGAATTCGAGGAAAACCC---GGAGGTAGTAGGAGG -CAGGGAAGGAAACAGAAGGTTTCATCT---CGCCACAATGTCTCATCCAATGAC---TTG -GGCATTTCTGCTTCC--------------------------------------------- ->gnl_Frave2.0_gene05408 ----------ATGGCGGGGGGAAAGTGGGTCCCCCCACCCCTGTCCCAGTTTCATCTTCAC -ATAAAGAGGTTCCGTCGACGTCAGAAAGTCTCTGGATCCAGTGGAAACACAGAACCTTCT -GGATACACAGACTGCAAAAATATCTCCAATCGA---------AGAATGGAAGAGAAAGGC -AATGACTTTTATGCTGTTATGGGGTTGAAGAAGGAATGCTCTGACTCGGAGCTCAGGAAT -GCTTATAAGAAACTTGCACTGATATGGCACCCAGATCGTTGCTCTGCCTCAGGA------ ----AATTCAAAGTTCGTGGAAGAAGCCAAGAAGAAGTTTCAGGACATTCAACAAGCCTAT -TCT------------------GTTCTGTCCGACGCCAACAAGAGGTTTCTGTACGATGTA -GGAGCTTATGAAAGT------------------------GATGATGACGAAAATGGAATG -GGTGATTTTTTAAACGAGATGGCGGTGATGATGAGCCAGACTAAGCCGAATGAAAATGGA -------GGAGAGAGCTTCGAACAATTGCAG------------------GAGCTCTTTGAA -GAAATGTTTCAGGGGGATATT------GAGGGC--------------------------- ----TTTAGCTCCTGCTCTCAGCCT------------------------------------ -------------CCTACTTCCTGTTCTACTTCCTCATCTTCA------------------ -------------------------------------TACGCATTGTACTGTGAAAATTCT -ACT------------------------CCCAGTAACAAACGTAATTCCTCC---GCAATG -AATTATGGCAAC------GCAACCCTGGACAGTTCTGGTTTTGATGCTCATTTT------ -------------CACAATTTCTGTGTAGGG---ACA------------------------ ----------GGCGGGAAGCCAGCAAAGGATCGGGAAGGGGAT---GCCAGGAAGAGAAAG -GATTCCAGGAGGAGTAACCGG--------------------------------------- ------------------------------------------------------------- ->gnl_Mimgu1.0_PACid_17694730 ----------ATGGCTGCTGAT--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GAAGAGAAAAGC -AGCGATTTTTACGGCGTTCTGGGGCTGAGGAAAGAATGTACGGCGGCGGAGCTCAGGGTT -GCCTACAAGAAACTTGCAATGAAATGGCATCCAGATCGTTGCTCTGCTTCTGGG------ ----AATTTAAAGTATGTGGAGGAAGCAAAGAACAAGTTTCAAGCTGTCCAACAGGCCTAT -TCT------------------GTGCTTTCCGATGCCAACAAAAGGTTTCTCTACGACGTA -GGAATCTACGATTCTGAA------------------GACGATGCTGACGAAAACGGTATG -GGTGATTTCTTGAATGAAATGGTAGCAATGATGGGCCAAAGTAAACCAAATGAAAATAAA -------AACGAGAGCTTCCAAGAATTGCAA------------------GATCTATTCGAG -GAAATATTCAACAATGACGCG------GAAGAGGTT------------------------ ----TTCAAGATTCCTCCTCCGCAC------------------------------------ -------TTTCCGTACCAAGATTCTTGCAGCGAGACCCGCACC------------------ ------------------------------------------------------------- ----------------------------GCATCGAACAAGAGGAACGCCCGC---GAAATG -GGCTCCGTAAAT---------------TTCAGTAATATCGAAGCCACACCATTT------ -------------GAAGGGTTCTGCATAGGG---GAAAATGTAATTTTTGGGGGAGAGAGA -ATACAAACGAGGCCCGGA---------------------------GGAGGTAGTAGGAGG -ACG------AAGCCGAAGATTTCGACA---TCGATCGAT--------------------- -------------------------------------------------GGTTTAATTAGT ->gnl_Nelnu1.0_NNU_010544-RA ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ----ATGAACCTGTTGTTGCAGAAATGGCATCCGGATCGATGCTCCTCGTCGGGA------ ----AACTCTAAGTTCGTGGAAGATTCAAAGAAGAAATTTCAGGCAATTCAAGAGGCTTAT -TCT------------------GTTCTATCCGACGAGAATAAGCGATTTCTTTACGACGTT -GGAGTTTACGACTGCGACGAC---------------GATGACGATGACGAAAACGGAATG -GGAGAATTTTTGGGGGAAATGGCGACTATGATGAGCCAAATTAAACCCAGCGAGAACGGG -------CCGGAGAGTTTGGAGAAGCTGCAG------------------GAACTGTTCGAG -GAAATGTTCCAAAGGGACATG------GATGATGGT------------------------ ----TTCTTCTCCCCCTCCCCCCAATGCGCT------------------------------ ----------TCTTTTTCTTCGTCTTGCTCATCTTCTTCGTCG------------------ ----------------------------TCGACGACTTATTTTTCATATAATAACAACAAG -CAC---------------------------GACAATAAAAGGAATTGCTCC---GACATC -AGTTCTATGGAC------GATTTCTACACATTTGGCACGGATTCTATACAATTC------ -------------AGCAATTTCTGCATTGGG---GTGGAA------GGAGGAGAA---GAT -TCAAAAGTAAGAGGAGGAAAG---------------------------TCAAGGCGGAAG -AGCAACAGGAGACAAAAAGTTTCATCGTCTAAACACGATCCGTCGTGCCGT--------- ------------------------------------------------------------- ->gnl_Solly2.3_Solyc03g123560.2.1 ----------ATG------------------------------------------------ ------------------------------------------------------------- -------------------------------------------------GAAGACAAAAGC -AATGATTATTATGCAGTTTTGGGGTTGAAGAAGGAATGCACTGACACAGAACTTAGGAAT -GCCTATAAGAAGCTTGCACTGAAATGGCACCCAGATCGCTGTTCAGCATCGGGG------ ----AATTTGAAGTTTGTAGATGAAGCAAAGAAGCAATTTCAGGCAATTCAAGAAGCATAT -TCT------------------GTGTTATCGGATGCAAACAAAAAGTTTTTGTACGATGTA -GGAGTTTATGACTCTGGT------------------GATGATGACGACGAAAATGGCATG -GGTGATTTCCTGAATGAAATGGCAGCTATGATGAGCCAAAATAAGTCCAATGAAAATCAG ----GGAGAAGAAACCTTTGAGGAATTGCAG------------------GATATGTTTAAT -GAAATGTTCAACAGTGATAAT------GGAACG--------------------------- ----TTTTCTTCTTCTTCTTCT--------------------------------------- -------------TCTTCTTCTTCTTGGACTGGAACTCCTTCA------------------ -------------------------------------ATGTGCTCTACTACATCATCTACA -TCTTCAAGTGAGACT---TTTTTAACCTTTCCCAACAAGAGAAGTTCAGGT---GAAATG -AAGTCGGGTAGT---------------AGTGTAAGAGGCGATTCTTGCCAATTC------ -------------CAAGGATTTTGTGTAGGG---GCA------------------------ ----------GGTGGAACTTCTGGAAAATGCAATGAAAGAGAA---CGAAGTTGGAGGAAA -AATTCCAAGAGTGGACGGAAGCAT------------------------------------ ------------------------------------------------------------- ->gnl_Sorbi1.4_PACid_1968370 ----------ATGGACGCCGGGGGA------------------------------------ ------------------------------------------------------------- ----------------GAGAAGTTCAGCGACGCGGCGGCGGCGGAGGGCGGTGAGGGCGGC -GGCGACCTCTACGCCGTCCTCGGGCTCAAGAAGGAGTGCTCCGACGCCGACCTCAAGGTC -GCTTACCGGAAGCTCGCCAAGAAATGGCACCCGGACAAATGCTCCTCCTCCAGC------ ----AGCGTGAAACACATGGAGGAAGCCAAGGAGAAGTTCCAAGAGATCCAGGGCGCCTAT -TCC------------------GTACTCTCTGACGCCAATAAACGGCTCCTCTACGATGTT -GGAGTATACGACGATGAGGAC---------------GACGAGGATAGCATGCAGGGGATG -GGTGACTTCATTGGTGAGATGGCCCAGATGATGAGCCAGGTGCGGCCGACGAGG------ -------CAGGAAAGCTTTGAGGAGCTGCAG------------------CAGCTTTTTGTG -GACATGTTCCAGTCTGATATT------GATTCAGGA------------------------ ----TTCTGCAACGGGTCTGCTAAG---GATCAAGTTCAGGGGCAAGCCAAAAGTAGAACA -TGCTCGACCTCACCTTCATCATCACCGTCCCCACCTCCTCCT------------------ -------------------------------CCTACTATAGTAAAGGAGGCAGAGGTGTCA -TCA------------------TGTAATGGCTTCAATAAGCGGGGTTCATCA---GCAATG -GACTCAGGGAAG---CCTCCAAGGCCT------GTTGAAGGCGGTGCTGGTCAG------ -------------GCTGGATTTTGTTTTGGG---GTGAGC------GATACGAAGCAAACG -CCGAAGCCGAGAGGTCCGAAC------------------------ACCAGCCGGAGGAGG -AACGGCCGGAAACAGAAGCTGTCATCC---AAGCACGATGTTTCATCTGAAGATGAAACG -GCCGGTTCC--------------------------------------------------- ->gnl_Thepa2.0_Tp3g12470 ----------ATGGCGTCGAACAAT------------------------------------ ------------------------------------------------------------- ----------------------------------------------AGCGAGAAAGGAAAC -GATGATTTGTATGGTGTTCTGGGCTTGAAGAAGGAATGTACGACGACGGAGCTCCGTACT -GCTTATAAGAAGCTTGCTCTAAGATGGCATCCAGATCGTTGTTCGTCAATGGGG------ ----ACTCCAGAGTTTGTAGACGAAGCAAAGAAGAAGTTTCAGGCAATCCAAGAGGCCTAT -TCT------------------GTTCTGTCTGACTCCAACAAGAGGTTCCTCTATGATGTT -GGAGCTTATAACAGT---------------------GATGATGAAGACCAAAACGGTATG -GGAGATTTCTTGAACGAAATGGCGGCAATGATGAATCAGTCCAAGCCTAGTGAGAATAAC ----TCAGGGGACAGTTTTGAGCAGCTACAA------------------GATCTGTTTAAT -GAGATGTTTCAAGGAGACGCT------GCAGCA--------------------------- ----TTCTCATCATCATCATCA--------------------------------------- -------------------TCATCTTGCTCTGCTTCGACTTTT------------------ -------------------------------------ACTTCCTCTTGTAGCTTTGTCTTT -GAC------------------------ACAAATAGTCAGCGGTCACCGTTT---GAGACA -AGCTCAATGGGG---------ACTAATGATCTTTTTGGATTCGATCACAGTGCT------ -------------CACACCTTCTCTTTAGGG---GTGGAA------CATCAGCAGGATTTC -AAGAAGGGGAAGAAC------------------------------AGTGGTGGAAGAAGA -AACAGAAGGAAGAACAATGCTCAATCGGCTGCTCACGAGACGGCGTCGTCCAACAACTAT -GGAGTCCCCACTTCA--------------------------------------------- ->gnl_Theca1.0_Tc06_g010450 ----------ATGGCAAATGGA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GAAGAGAAAAAC -AATGATTTTTATGCAGTTTTGGGGTTGAATAAAGAATGCACTCCGACAGAGCTCAGGACT -GCTTATAAGAAACTTGCCCTGAGATGGCACCCTGATCGTTGCTCAGCTTCGGGA------ ----AATTCAAAGTTCGTGGAAGAAGCCAAGAAGAAATTTCAGGCCATTCAACAAGCCTAT -TCT------------------GTTCTGTCTGACTCAAACAAGAGGTTTCTGTACGACGTA -GGAGCTTATGACAGT------------------------GATGATGACGAAAATGGAATG -GGAGATTTTTTGAACGAAATGGCAGGGATGATGAGCCAGACAAAATCTAATGAAAATGGA -------GGGGAAAGCTTCGAGGAACTACAG------------------GAATTGTTTGAA -GAAATGTTCCAAGCGGACATT------GATTCA--------------------------- ----TTTGAGTCTACTGGTCAG--------------------------------------- -------------TCCACTCCTTCCTGCTCTGCTTCATCTTCG------------------ -------------------------------------TTTGGGTCATATGGTGAAAGTTCC -AGC---------------------------TCCAACAAGCGGAATTCCTCT---GAAATG -AGTTCTGTGGAG---ACTAGGCTGGAGAGTTCTTCTAGCTTCGATGCACAATTT------ -------------CACAGTTTTTGTCTCGGG---GTGGAA------CACAGGCAAGATATC -AAGCAACACAGAGGAGCCAGAGGAGGAATGCGAGGAGCAGCCGGCGGTAGTAGACGGAGA -AATGGCAGGAAACAAAAGGTTTCATCT---GGCCATGATGTTACTTCCAACGAC---TGT -GGCATTTCTGCTTCA--------------------------------------------- ->gnl_Vitvi12X_PACid_17827068 ----------ATGGCCGCCGGA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GAAGAGAAGAGC -AATGATTTTTATGCCGTTCTAGGGTTGAAAAAGGAATGCACCGCCTCCGAGCTCAGAAAT -GCGTACAAGAGACTTGCCCTGATGTGGCACCCAGATCGTTGCTCCTCGTCGGGA------ ----AACTCGAAATTCGTGGAAGAAGCGAAGAAGAAATTTCAGGCCATACAAGAAGCCTAT -TCA------------------GTTCTCTCTGATGCGAATAAAAGGTTTCTGTACGACGTT -GGAGCCTACGACAGC------------------------GATGATGACGAAAACGGAATG -GGGGATTTTTTGAATGAGATGGCGGTTATGATGAGCCAAACCAAGTCCAATGAAAATGGG -------AAGGAGAGCTTTGAGGAGTTGCAG------------------GAGCTCTTTGAG -GATATGTTCCAAAGGGATGTC------GACGCA--------------------------- ----TTCAACTCTGCCTCTCATCAC------------------------------------ -------------CCCATGAACTCTTTCCCCAGTTCTACTTCC------------------ -------------------------------------ACTTCTTCCTACTGCGAAAGCTCC -AAT------------------------GCCAACAACAAGCGGAATTCGGCT---GAAATG -GGCTCTGGAAGGATGATGAGTGCAGGGGAGTCCTCTGCTTTTGATGCCCACTTT------ -------------CAGAGCTTCTGCTTTGGG---ACA------------------------ ----------GGCGGCACGCCAGGGAGATTTCAGGAGGGGGAA---AGGAGCAAGAGGAGG -AATTCCAGGAGGAGCCAACGG--------------------------------------- ------------------------------------------------------------- ->gnl_Selmo1.0_PACid_15401289 ----------ATG------------------------------------------------ ------------------------------------------------------------- -------------------------------------------------GAGAAGAGGAAA -GAGGATCCCTACACTGTTCTTGGTGTCCAAAAGTCGAGTTCTAGCTCGGAAATTCGCTCC -GCTTATCGGAAGCTCGCCATGAAATGGCATCCAGATAAG--------------------- ----CAACACTCTTTAGAGGATCAAGCAAAAGCGAAGTTCCAGGGCATTCAAGAAGCTTAT -TCA------------------GTGCTATCCGACGACAAAAAAAGAGTTCTTTATGATTCG -GGACTTTATGACGAGGGA------------------GATGACGAG--------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ----------------------------------GTGAGT--------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ->gnl_Orysa6.0_PACid_16864430 ----------ATGGCCCGCGGCGGCGGC--------------------------------- ------------------------------------------------------------- -------------GGC------------------------------GGCGGCGGCGCGGAC -GCCGACCTGTACGCCGTCCTCGGCCTCAGCAGGGAGTGCACCGACGCCGACCTCAGGCTC -GCCTACCGCAAGCTCGCCATGATATGGCATCCGGACAGGTGCTCGGTGGCCGGCGGCAGC -GCGAGCGCGGCGGGCGTCGACGAGGCCAAGGAGCGATTCCAGGAGATCCAGGGCGCCTAC -TCC------------------GTGCTCTCCGACTCCAACAAGCGCTTCCTCTACGACGTC -GGCGTCTACGACGGCAACGACGGCGACGACGACGACGACGAAGCAGATCTGTCGGGGATG -GGCGATTTCCTCGGCGAGATGGCGCAGATGATGAGCCAGGCGACGCCT------------ -------GCGGAGAGCTTCGAGGAGTTGCAG------------------CAGCTGTTCGTG -GACATGTTCCAGGACGACATC------GACGCCGGC------------------------ ----CTCTGCCAGTCGACGCCG--------------------------------------- -------------CCGCCGCCGTCATGGCCGTCGCCTCCGGCG------------------ ----------------------------------------GCCGCCAATGCACGATCGCCG -GCGGCGGCGGCGACT---TCACGCAAGGGCGTGAACAAGCGGTGCTCACCG---GCGGCG -ATGGACATGGAC---------------TCCGGTTTGAGCAGCCTGCTGGGCATT------ -------------TCGGGCTTCTGTTTCGAG---GCGCCA------TGGACGTCGCAGGAC -GCGAGCACTGCCGCCGGCGGTGGC---------------------GGCGGCAAGAGGAGA -AAGCAGAGGCCGCCGCCGGCG---------AGCCACAACGTG------------------ ------------------------------------------------------------- ->gnl_Sorbi1.4_PACid_1982925 ----------ATGGCTGCTACAAGTCAC--------------------------------- ------------------------------------------------------------- -------------TGCGGCAACATCCAGGACCAGGACGAAGAAGCTTCGGCTCCTGGCGCC -GCCGACCTCTACGCCGTGCTCGGGCTCAACAGGGAGTGCACCGACGCCGAGCTCAGGGTC -GCGTACCGGCGGCTCGCCATGATATGGCATCCGGACAGGTGCTCGGCGTCCGGC------ -AGCTCGCCGGCGCGCATGGAGGAGGCCAAGGAGCGGTTCCAGGAGATCCAGGGCGCCTAC -TCC------------------GTGCTCTCCGACTCCAACAAGCGGCTCCTCTACGACGTC -GGCGTCTACGACAGCGACGAC---------------GACGAGGCTGACCTGTCGGGGATG -GGCGACTTCCTCGGAGAGATGGCCGACATGATGAGCCAGGCCACGCCA------------ -------ACGGAGACCTTCGAGGAGCTGCAG------------------CAGGTGTTCGTG -GACATGTTCCAGGACGACCTGGAC---GACGCCGGC------------------------ ----TTCTTCGGCGGGCTTCCGACG---ACGGGCCGCAGGGCCCAGGCA------CCCAGC -ACCTCGCTGCCGCCGTCGGTGTCGTCGTCGCCGTTGCGGCCG------------------ -------------------------------ACGCCTGCCGCTGGAAGAAGCAAGGGTCCG -CAAGCGACGCCGTCGTCGTCGTTTAAAGGCGTCGAGAGGCGGGGTTCGACG---TCGACG -GCGAAACGGCCGAGGCCCAACGGGTCGGCGGGCCTGGAATCGGACCTGGGCCTC------ -------------TCCGGATTCTGCTTCATG---GTGAGT------AAGGAGATGAGCAAG -TCGAAGGAGAGGCAAGCGGTA---------TGGGCCAGTGAC---GACGGTGACAGGAGC -ACCGATGGCAAGCAGAGGTTGTCGACG---AGCCGCGATGTCTCCGGTGGTGGG---ATG -TCACGCTCACTGCAGGGCCAAAGCAGCAAAAACTTGTTGCAGTGTATGGCCTCTAAGTCT ->gnl_Medtr3.5_Medtr8g022310.3 ----------ATGGCTAACGAA--------------------------------------- ------------------------------------------------------------- -------------------------------------------------GGAAACAAAAGC -AATGATTTCTATGCAGTTTTGGGATTGAATAAGGAATGCTCTGATTCAGAGCTAAGGAAT -GCTTATAAGAAACTTGCACTGAAATGGCATCCAGATCGTTGTTCAGCTTCAGGG------ ----AATGTGAAGTTTGTGGAAGAAGCTAAGAAGAAATTTCAGGCAATTCAAGAAGCCTAT -TCT------------------GTTTTATCTGACTCGAACAAGAGATTAATGTACGACGTT -GGAGTTTACGACAGT------------------------GATGATGACGAAAATGTAAGG -CACTTGTTT--------------------------------------------------- ----------CACACCATTCATGAGTTGGGG------------------ACCCTCTTTTGC -GTTATGTTTTGTTTCTTCATTTCCTTGAGG------------------------------ -------GGAGAG------------------------------------------------ ----------------------------AAGAGAAGCAACCTT------------------ -------------------------------------AATTTAACCTTTTCACTTTCACAT ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ->gnl_Nelnu1.0_NNU_000115-RA ----------ATGGAGGTGGAC--------------------------------------- ------------------------------------------------------------- ----------------------------------------------TCCCATCGATCATCT -CCATCTTACTACACCATCCTTGGTGTAGATCAGAATTCCTCCGCTTCCGAGATACGCAAT -GCTTACAGGAAGCTCGCGATGCAATGGCATCCAGACAAATGGACGAAAACTCCG------ ----------TCGCTCTTAGAGAAAGCCAAGAGTAAATTCCAGCAAATCCAGGAGGCTTAT -TCGGGTGGGTTACTCGTTTTCATGTTATCGGATCAGGGGAAGAGAACACTGTATGATGTC -GGTCTGTATGACCCGGACGAT---------------GAAACGAATGACGAGGTGGGGCTT -CGCAGATTT------CATGCAGGAGATGATATCTCTCATGAACGATGT------------ -------GAAGAAACAGGAGAAGAAATACAGCTTGGAGGAACTACAGGAGATGTTAGTGGA -AATGTCACAAGGGCTGGAGTT------GAAGATGGAGAGTGCTGGTGGTGTGTGGTTGTT -AGATGGAGCTGCAGCCTCAAGGAG------------------------------------ ------------------------------------------------------------- ------------------------------------------------------------- -------------------------------------------------------GAGCTC -AAAGAGGGCCAG------------------------------------------------ -------------ATGGGAATCATCAGCGAG---TCCGAC------GACGCT--------- ------------------------------------------------------------- -------------------------------GGACACGACACACCTTCTCTCCCCCACTTG -CACGGTTCAGAGCTG---------------GAATTGTTAGGAAGAACCGGCTGTTGCAAT ->contig_7 ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- ------------------------------------------------------------- -------------------------------------------GAGAATGAGTGGTCTGGG -GCTGAGTTTTTGAATGAAATGGCGGCAATGATGACTCAAAATAAATCCAATGAAAACGGA -------ACCGGAACTTTTGAAGAACTGCAA------------------CAATTGTTCGAT -GAAATGTTTCAGAGCGACATC------GAGTCC--------------------------- ----TTCAATGGTTGTTCTTCATCA------------------------------------ -------------TCCAATGAAACATGTAGC------------------------------ ------------------------------------------------------------- ----------------------------AACTCGAACAAGAGGAATTCCATT---GAGTCG -AGCTCGGCTAAT------------------------------------------------ -TTCAGACCCGAAAATGGAAACGAAAGCGGC------------------------------ ----------------------------------------GAG---ATTAGCGGGAAGAAG -AATACTAGGAAAGGTAAAGGTGACGNN--------------------------------- -------------------------------------------------------------