Mercurial > repos > greg > plant_tribes_gene_family_integrator
changeset 7:51c2f0c74349 draft
Uploaded
| author | greg |
|---|---|
| date | Tue, 04 Sep 2018 08:51:14 -0400 |
| parents | 00f14e3bbe9f |
| children | a4009bf30e70 |
| files | get_clustering_methods.py macros.xml |
| diffstat | 2 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/get_clustering_methods.py Thu Aug 30 09:45:52 2018 -0400 +++ b/get_clustering_methods.py Tue Sep 04 08:51:14 2018 -0400 @@ -6,7 +6,6 @@ if not os.path.isdir(file_path): return options methods_dir = os.path.join(file_path, "alns") - for i, file_name in enumerate(os.listdir(methods_dir)): - full_path = os.path.join(file_path, file_name) - options.append((file_name, full_path, i == 0)) + for i, dir_name in enumerate(os.listdir(methods_dir)): + options.append((dir_name, dir_name, i == 0)) return options
--- a/macros.xml Thu Aug 30 09:45:52 2018 -0400 +++ b/macros.xml Tue Sep 04 08:51:14 2018 -0400 @@ -9,6 +9,7 @@ <options from_data_table="plant_tribes_scaffolds"> <column name="name" index="1"/> <column name="value" index="2"/> + <column name="path" index="2"/> <filter type="sort_by" column="1"/> <validator type="no_options" message="No PlantTribes scaffolds are available. Use the PlantTribes Scaffolds Download Data Manager tool in Galaxy to install and populate the PlantTribes scaffolds data table."/> </options>