diff test-data/3722.faa.aln @ 6:a7867769a706 draft

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author greg
date Mon, 30 Oct 2017 09:53:46 -0400
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children 13d2d138e0e2
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/3722.faa.aln	Mon Oct 30 09:53:46 2017 -0400
@@ -0,0 +1,312 @@
+>gnl_Glyma1.01_PACid_16266208
+---MANE-------------------------------------------------GKKS
+NNFYSILGLSKECTELELKNAYRKLAKKWHPDRCSATG---NLELVEEAKKKFQEIREAY
+S------VLSDANKRLMYDVGVYDS--------DDDENGMGDFLDEMLTMMSHTKSNENG
+--EESFEELQ------QLFEDMFQADI--GL----------DGGPSL-------------
+----ASSDSSTSSA------------------YMTYSESSS---------SNKRNSS-EM
+NFGK---AENSSVFDASY------QNFCFG-VN--QLQDIKKGK---GGILGGGGRSRHR
+SGRKQKMFY-GHDV--------------------------
+>gnl_Glyma1.01_PACid_16266209
+---MANE-------------------------------------------------GKKS
+NNFYSILGLSKECTELELKNAYRKLAKKWHPDRCSATG---NLELVEEAKKKFQEIREAY
+S------VLSDANKRLMYDVGVYDS--------DDDENGMGDFLDEMLTMMSHTKSNENG
+--EESFEELQ------QLFEDMFQADI--GL----------DGGPSL-------------
+----ASSDSSTSSA------------------YMTYSESSS---------SNKRNSS-EM
+NFGK---AENSSVFDASY------QNFCFG-TG--EPTPRYKEG--------KGGNSRRR
+R---------------------------------------
+>gnl_Glyma1.01_PACid_16266210
+---MANE-------------------------------------------------GKKS
+NNFYSILGLSKECTELELKNAYRKLAKKWHPDRCSATG---NLELVEEAKKKFQEIREAY
+S------VLSDANKRLMYDVGVYDS--------DDDENGMGDFLDEMLTMMSHTKSNENG
+--EESFEELQ------QLFEDMFQADI--GL----------DGGPSL-------------
+----ASSDSSTSSA------------------YMTYSESSS---------SNKRNSS-EM
+NFGK---AENSSVFDASY------QNFCFG-VG--HVNYHYQ------------------
+----------------------------------------
+>gnl_Glyma1.01_PACid_16301083
+---MADE-------------------------------------------------GNKS
+NNFYSILGLKKECTELELKNAYRKLAKKWHPDRCSATG---NSELVEEAKKKFQEIREAY
+S------VLSDANKRLMYDVGVYDS--------DDDENGMGDFLDEMLTMMSQTKSNENG
+--EESFEELQ------QLFEDMFEADI--GL----------DGGPSL-------------
+----ASSDCSTSSA------------------YMTYSESSS---------SNKHNSS-EM
+NFGK---AENSSVFDAGY------QNFCFG-VN--QLQDIKKKK---GGIL-GGGRSRHR
+NGRKQNMSY-GHDVSSNDYPGISTK---------------
+>gnl_Glyma1.01_PACid_16301085
+---MADE-------------------------------------------------GNKS
+NNFYSILGLKKECTELELKNAYRKLAKKWHPDRCSATG---NSELVEEAKKKFQEIREAY
+S------VLSDANKRLMYDVGVYDS--------DDDENGMGDFLDEMLTMMSQTKSNENG
+--EESFEELQ------QLFEDMFEADI--GL----------DGGPSL-------------
+----ASSDCSTSSA------------------YMTYSESSS---------SNKHNSS-EM
+NFGK---AENSSVFDAGY------QNFCFG-VG--HVNYHYQ------------------
+----------------------------------------
+>gnl_Glyma1.01_PACid_16301084
+---MADE-------------------------------------------------GNKS
+NNFYSILGLKKECTELELKNAYRKLAKKWHPDRCSATG---NSELVEEAKKKFQEIREAY
+S------VLSDANKRLMYDVGVYDS--------DDDENGMGDFLDEMLTMMSQTKSNENG
+--EESFEELQ------QLFEDMFEADI--GL----------DGGPSL-------------
+----ASSDCSTSSA------------------YMTYSESSS---------SNKHNSS-EM
+NFGK---AENSSVFDAGY------QNFCFG-TG--EPTPRYKEE--------KGGNSRRR
+----------------------------------------
+>gnl_Medtr3.5_Medtr8g022310.1
+---MANE-------------------------------------------------GNKS
+NDFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASG---NVKFVEEAKKKFQAIQEAY
+S------VLSDSNKRLMYDVGVYDS--------DDDENGMGDFLNEMVTMMSQTKSNENG
+--EESFEELQ------QLFDDMFQADI--GL----------NGSTSL-------------
+----NASGCSTSST------------------FMTFSESSN---------SNKRNST-QM
+NFGK---AEDSSSFGANY------QNFCFG-MK--HLQEDVEKE--KGGILEGGGSKKQR
+KGRKQKISC-GH-VSSNDHPGISAN---------------
+>gnl_Medtr3.5_Medtr8g022310.2
+---MANE-------------------------------------------------GNKS
+NDFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASG---NVKFVEEAKKKFQAIQEAY
+S------VLSDSNKRLMYDVGVYDS--------DDDENGMGDFLNEMVTMMSQTKSNENG
+--EESFEELQ------QLFDDMFQADI--GL----------NGSTSL-------------
+----NASGCSTSST------------------FMTFSESSN---------SNKRNST-QM
+NFGK---AEDSSSFGANY------QNFCFG-VN--LVNYHYQ------------------
+----------------------------------------
+>gnl_Musac1.0_GSMUA_Achr6T31040_001
+---MAAE-------------------------------------------------EDKS
+GDFYAVLGLRKECSETELRNAYKKLAMRWHPDKCLASG---NAQIVGEAKEKFQEIQKAY
+S------VLSDSNKRFLYDVGVYDND------DDNDENGMGDFIGEMLEMMSQTKPNENS
+--QDSFQELQ------ELFVEMFQDDL--DAG---------FGGSIFH-DCPWAQP----
+---TNGQDCWTSSG------------------LHFANGRSK--------CGNKRGNS-AV
+NLGK----VNLEELEHGT------SDFYFG-LN--DAAQPSQGKGGS--------NNKRR
+NGRKQKVSS-NHDVSS------------------------
+>gnl_Musac1.0_GSMUA_Achr9T18140_001
+---MAAG-------------------------------------------------EEKI
+GDFYTVLGLRKECSEAELRIAYKKLAMRWHPDKCSASG---NHRRMEEAKEKFQEIQKAY
+S------VLSDSSKRFLYDVGIYDNE------DDNDEKGMGDFIGEIAQMMSQTKSGENG
+--HDSFEELQ------RMFLDMFQDDL--DAG---------FGDSSIH-SGPQARP----
+---TDGLNCSMPSG------------------LQFADGGNN--------GSNKRGNS-EK
+--------AKLDGLENSS------TGFCFG-LN--DAGQSSKGKGSA--------NSKRR
+NGRKQKVSS-KHDVSSSD-AEVSF----------------
+>gnl_Musac1.0_GSMUA_Achr8T23700_001
+---MASD-------------------------------------------------MDAS
+GDFYSVLGLKKECSEAELRNAYKKLALKWHPDKCSASG---NEIRMKEAKQQFQEIQKAY
+S------VLSDSNKRFLYDVGAYDKD------DDKDEEGMVEFLGEMAQMMRQTKCCGSG
+--QESFEQLQ------QMFVEMFHDDL--DAG---------F------------------
+--------CGHSSA---------------------TSGAAS--------CGNKRDNS-AM
+DSGK----RKPDELDPAA------IGFCLG-TK--DAGQSSKGRGS---------NSKRR
+NRRKQKASS-KHDNSSHN-AKVSA----------------
+>gnl_Musac1.0_GSMUA_AchrUn_randomT02210_001
+---MEGD-------------------------------------------------EEKS
+GDFYAVLGLKKEGSMAELKNAYKKLAMKWHPDKCPASG---NKIRMDKAKEKFQEIQKAY
+S------VLSDSNKRFLYDVGVYDKD------DEEDEEGMGDFIGEIAQMMSQSKPSGSG
+--HESLEELH------RQVVEMFLDEL--DAGD-------RFSSANQ-------------
+----GASSCDGRDD----------------------------------GGGNKRGNW-AV
+DWGK----EKLNELGPGT------GGFCFG-VS------------------------RRV
+HSFDLMIDV-VHLIHSDL-------------------TLE
+>gnl_Orysa6.0_PACid_16843526
+---MADGG-------------------------------------EKC-RDAAG-EGGGG
+GDLYAVLGLKKECSDADLKLAYRKLAMRWHPDKCSSSS---SAKHMEEAKEKFQEIQGAY
+S------VLSDSNKRFLYDVGVYDDDD----NDDDNLQGMGDFIGEMAQMMSQARPTR--
+--QESFKELQ------QLFVDMFQADL--DSG---------FCNGPSKCYHTQAQSQTRT
+SSTSPSMSPSPPPP------------------VATEAESPS------CNGINKRGSS-AM
+DSGK-PPRASEVGSGQSQ------SGFCFG-KS--DAKQAAKTRSGNT-------ASRRR
+NGRKQKVSS-KHDVSSEDEMPGSQW-----------HGVA
+>gnl_Orysa6.0_PACid_16843528
+---MADGG-------------------------------------EKC-RDAAG-EGGGG
+GDLYAVLGLKKECSDADLKLAYRKLAMRWHPDKCSSSS---SAKHMEEAKEKFQEIQGAY
+S------VLSDSNKRFLYDVGVYDDDD----NDDDNLQGMGDFIGEMAQMMSQARPTR--
+--QESFKELQ------QLFVDMFQADL--DSG---------FCNGPSKCYHTQAQSQTRT
+SSTSPSMSPSPPPP------------------VATEAESPS------CNGINKRGSS-AM
+DSGK-PPRASEVGSGQSQ------SGFCFGQKS--DAKQAAKTRSGNT-------ASRRR
+NGRKQKVSS-KHDVSSEDEMPGSQW-----------HGVA
+>gnl_Poptr2.2_PACid_18217800
+---MANGGE----------------------------------------------DKWKS
+NDLYQVLGLNKECTDTELRSAYKKLALRWHPDRCSASG---NSKFVEEAKKKFQAIQQAY
+S------VLSDTNKRFLYDVGVDDS--------DDDENGMGDFLNEMAVMMSQTKPSENM
+--EESLEELQ------ELFDEMFQEDL--HS----------FGIDSQ-------------
+----AAPSC--PPS------------------YVSYSESSN--------SNNKRVSA-DM
+NLGK-TKVDDSSSFNSHF------EKFCLG-T-----------GGTAATFQEGEGGSKRR
+NSRRSQRQT-KARQETKSFFGL------------------
+>gnl_Poptr2.2_PACid_18234651
+---MENGGE----------------------------------------------EKGKS
+NDFYQVLGLNKDCTATELRNAYKKLALKWHPDRCSASE---NSRFVDEAKKKFQTIQQAY
+S------VLSDTNKRFLYDVGVYDS--------EDDENGMGGFMNEMAAMMSQTKPHENV
+--EESFEELQ------GLFEEMFQEDL--DS----------FGIACQ-------------
+----ATT-------------------------CVSYSESSN--------SNDKRVSV-DM
+NLKK-TKVDDSSGFNSHV------EKFCLG-V-----------SGTPAIFQEGE-GSKRR
+SSRRNRR---------------------------------
+>gnl_Poptr2.2_PACid_18234649
+MLRMENGGE----------------------------------------------EKGKS
+NDFYQVLGLNKDCTATELRNAYKKLALKWHPDRCSASE---NSRFVDEAKKKFQTIQQAY
+S------VLSDTNKRFLYDVGVYDS--------EDDENGMGGFMNEMAAMMSQTKPHENV
+--EESFEELQ------GLFEEMFQEDL--DS----------FGIACQ-------------
+----ATT-------------------------CVSYSESSN--------SNDKRVSV-DM
+NLKK-TKVDDSSGFNSHV------EKFCLG-VE--HQQSFKKGKGVRGGVQGGT-GGRER
+KGRKQEVSS-GYDVSSHD-HGISAS---------------
+>gnl_Poptr2.2_PACid_18234650
+---MENGGE----------------------------------------------EKGKS
+NDFYQVLGLNKDCTATELRNAYKKLALKWHPDRCSASE---NSRFVDEAKKKFQTIQQAY
+S------VLSDTNKRFLYDVGVYDS--------EDDENGMGGFMNEMAAMMSQTKPHENV
+--EESFEELQ------GLFEEMFQEDL--DS----------FGIACQ-------------
+----ATT-------------------------CVSYSESSN--------SNDKRVSV-DM
+NLKK-TKVDDSSGFNSHV------EKFCLG-VE--HQQSFKKGKGVRGGVQGGT-GGRER
+KGRKQEVSS-GYDVSSHD-HGISAS---------------
+>gnl_Soltu3.4_PGSC0003DMP400016105
+---M-------------------------------------------------------G
+NDYYAVLGLKKECTETELRNAYKKLALKWHPDRCSASG---NSKFVDEAKKKFQAIQEAY
+S------VLSDANKRFLYDVGVYDSG------DDDDENGMGDFLNEMAAMMSQNKSNENQ
+--EETFEELQ------DMFDEIFNSDN--GM------------SSSS-------------
+----SSSSRTGTPS------------------MCSTTSSTSSSET-FFTFSNKRSSG-EM
+KSGK--------GDSCQF------QGFCEG-T-----------GGASGKSNERE-RSRRK
+NSKSGRKQ--------------------------------
+>gnl_Soltu3.4_PGSC0003DMP400016106
+---M-------------------------------------------------------G
+NDYYAVLGLKKECTETELRNAYKKLALKWHPDRCSASG---NSKFVDEAKKKFQAIQEAY
+S------VLSDANKRFLYDVGVYDSG------DDDDENGMGDFLNEMAAMMSQNKSNENQ
+--EETFEELQ------DMFDEIFNSDN--GM------------SSSS-------------
+----SSSSRTGTPS------------------MCSTTSSTSSSET-FFTFSNKRSSG-EM
+KSGK--------GDSCQF------QGFCEG-VE--HLEKAMKENGVGGKIPRVD-GSNRM
+DAKRQKVLS-------------------------------
+>gnl_Ambtr1.0.27_AmTr_v1.0_scaffold00007.329
+---MAPR-------------------------------------------------GEKD
+SDFYAILGLKKECSASDLRNAYKRLALRWHPDRCSASG---NTKFVEECKKKFQAIQQAY
+S------VLSDANKRFLYDVGAYGS--------DDDDQGMGEFLGEMAVMMSQTKPSEKG
+--PESFEDLQ------NLFQEMFERDL--DM----------FKSSTSH------------
+----NNNNDNNNNN------------------HRSSDNNNCSSVH-CFSNTNKRNCS-DM
+NAGE-ASEVGRFAFSCYATEFLHKQTFSVG-AD------DVRSES----------SNKRR
+NGRKQKSTS-SSRKS-------------------------
+>gnl_Aquco1.0_PACid_18141277
+---MAS--------------------------------------------------EEEA
+SDFYKVLGLKNNCSSLELRNAYKKLALKWHPDRCAASG---NSKFVEEAKKNFQAIQEAY
+S------VLSDEQKRFMYDVGVYDKD------DDDENEDMGDFLGEMMSMMKQENTSADG
+--QQSFEDLQ------NLFQEMVQNDK--EF----------YNPASQ-------------
+----NSSIYNASNNMFSFSNNENLNNASNNTFSSFYNENLN--------SSNKKSCS-SM
+SAEN--TKVDFNMESLDF------RSFSIG-LE--GGTSFQNSKGRG--------VTGRR
+TGRKQKGSS-CNDMSSHD-SKILA----------------
+>gnl_Arath10_AT3G14200.1
+---MASSN-----------------------------------------------SEKIN
+ENLYAVLGLKKECSKTELRSAYKKLALRWHPDRCSS------MEFVEEAKKKFQAIQEAY
+S------VLSDSNKRFLYDVGAYNTD------DDDDQNGMGDFLNEMATMMNQSKPSDNN
+-TGDSFEQLQ------DLFNEMFQGDA--AA----------FPSS---------------
+------SSCSTSNF------------------TSSRSFVFD--------TNSQRSSSFAT
+SSMG--MNNDPFGYDPRA------HSFSLG-VD--HQQEFKKGKN----------NGGRR
+NRRKNNVPSAGHETSSSNNYGVPTS---------------
+>gnl_Bradi1.2_Bradi3g60090.1
+---MATGG-------------------------------------DKCGGKPAA-AGVGG
+GDLYSVLGVNKECSDADLKVAYRKLAMRWHPDRCSSSS---STKHMEEAKEKFQEIQGAY
+S------VLSDANKRFLYDVGVYEEHEE---EDDDTLQGMGDFLGEMAHMMSQTQPAR--
+--QESFEELQ------QLFVDMFQSDI--ESG---------FCNGPAK-DHDPVQRQTRT
+FSTPPSPSPSPPPP------------------LATVDEAAS------CNGINKRGSS-AM
+GSGK-PPRAGEVSGGHGQ------SEFCFG-MS--DAKQAPKARGGN--------ASRRR
+NGQKQKLSS-KHDVSSGDEMPRP-------------HAAV
+>gnl_Carpa1.181_PACid_16420351
+---MADG------------------------------------------------EDKNN
+SDLYAVLGLNKECTPAELRNAYKKLAMRWHPDRCSASG---NSMFVEEAKKKFQAIQEAY
+S------VLSDANKRFLYDVGAYES--------DDDENGMGDFLNEMAAMMSQTKPNENG
+NAQESFEELQ------ELFQEMFQGDMGFNT----------FGSSSQP------------
+----TTSSCSASSA------------------YATCSETSN-------PNNNKRNSS-EM
+NYGK-KKVDDSSGFHAHF------QTFCLG-VE--QQQDFKKGKEARGGIRGKP-GGSRR
+QGRKQKVSS-RHNVSSND-LGISAS---------------
+>gnl_Frave2.0_gene05408
+---MAGGKWVPPPLSQFHLHIKRFRRRQKVSGSSGNTEPSGYTDCKNISNR---RMEEKG
+NDFYAVMGLKKECSDSELRNAYKKLALIWHPDRCSASG---NSKFVEEAKKKFQDIQQAY
+S------VLSDANKRFLYDVGAYES--------DDDENGMGDFLNEMAVMMSQTKPNENG
+--GESFEQLQ------ELFEEMFQGDI--EG----------FSSCSQP------------
+----PTSCSTSSSS------------------YALYCENST--------PSNKRNSS-AM
+NYGN--ATLDSSGFDAHF------HNFCVG-T-----------GGKPAKDREGD-ARKRK
+DSRRSNR---------------------------------
+>gnl_Mimgu1.0_PACid_17694730
+---MAAD-------------------------------------------------EEKS
+SDFYGVLGLRKECTAAELRVAYKKLAMKWHPDRCSASG---NLKYVEEAKNKFQAVQQAY
+S------VLSDANKRFLYDVGIYDSE------DDADENGMGDFLNEMVAMMGQSKPNENK
+--NESFQELQ------DLFEEIFNNDA--EEV---------FKIPPPH------------
+--FPYQDSCSETRT-----------------------------------ASNKRNAR-EM
+GSVN-----FSNIEATPF------EGFCIG-ENVIFGGERIQTRPG---------GGSRR
+T--KPKIST-SID-----------------------GLIS
+>gnl_Nelnu1.0_NNU_010544-RA
+------------------------------------------------------------
+---------------------MNLLLQKWHPDRCSSSG---NSKFVEDSKKKFQAIQEAY
+S------VLSDENKRFLYDVGVYDCDD-----DDDDENGMGEFLGEMATMMSQIKPSENG
+--PESLEKLQ------ELFEEMFQRDM--DDG---------FFSPSPQCA----------
+---SFSSSCSSSSS---------------STTYFSYNNNKH---------DNKRNCS-DI
+SSMD--DFYTFGTDSIQF------SNFCIG-VE--GGE-DSKVRGGK---------SRRK
+SNRRQKVSSSKHDPSCR-----------------------
+>gnl_Solly2.3_Solyc03g123560.2.1
+---M----------------------------------------------------EDKS
+NDYYAVLGLKKECTDTELRNAYKKLALKWHPDRCSASG---NLKFVDEAKKQFQAIQEAY
+S------VLSDANKKFLYDVGVYDSG------DDDDENGMGDFLNEMAAMMSQNKSNENQ
+-GEETFEELQ------DMFNEMFNSDN--GT----------FSSSSS-------------
+----SSSSWTGTPS------------------MCSTTSSTSSSET-FLTFPNKRSSG-EM
+KSGS-----SVRGDSCQF------QGFCVG-A-----------GGTSGKCNERE-RSWRK
+NSKSGRKH--------------------------------
+>gnl_Sorbi1.4_PACid_1968370
+---MDAGG-------------------------------------EKFSDAAAAEGGEGG
+GDLYAVLGLKKECSDADLKVAYRKLAKKWHPDKCSSSS---SVKHMEEAKEKFQEIQGAY
+S------VLSDANKRLLYDVGVYDDED-----DEDSMQGMGDFIGEMAQMMSQVRPTR--
+--QESFEELQ------QLFVDMFQSDI--DSG---------FCNGSAK-DQVQGQAKSRT
+CSTSPSSSPSPPPP----------------PTIVKEAEVSS------CNGFNKRGSS-AM
+DSGK-PPRP--VEGGAGQ------AGFCFG-VS--DTKQTPKPRGPN--------TSRRR
+NGRKQKLSS-KHDVSSEDETAGS-----------------
+>gnl_Thepa2.0_Tp3g12470
+---MASNN-----------------------------------------------SEKGN
+DDLYGVLGLKKECTTTELRTAYKKLALRWHPDRCSSMG---TPEFVDEAKKKFQAIQEAY
+S------VLSDSNKRFLYDVGAYNS-------DDEDQNGMGDFLNEMAAMMNQSKPSENN
+-SGDSFEQLQ------DLFNEMFQGDA--AA----------FSSSSS-------------
+------SSCSASTF------------------TSSCSFVFD--------TNSQRSPF-ET
+SSMG---TNDLFGFDHSA------HTFSLG-VE--HQQDFKKGKN----------SGGRR
+NRRKNNAQSAAHETASSNNYGVPTS---------------
+>gnl_Theca1.0_Tc06_g010450
+---MANG-------------------------------------------------EEKN
+NDFYAVLGLNKECTPTELRTAYKKLALRWHPDRCSASG---NSKFVEEAKKKFQAIQQAY
+S------VLSDSNKRFLYDVGAYDS--------DDDENGMGDFLNEMAGMMSQTKSNENG
+--GESFEELQ------ELFEEMFQADI--DS----------FESTGQ-------------
+----STPSCSASSS------------------FGSYGESSS---------SNKRNSS-EM
+SSVE-TRLESSSSFDAQF------HSFCLG-VE--HRQDIKQHRGARGGMRGAAGGSRRR
+NGRKQKVSS-GHDVTSND-CGISAS---------------
+>gnl_Vitvi12X_PACid_17827068
+---MAAG-------------------------------------------------EEKS
+NDFYAVLGLKKECTASELRNAYKRLALMWHPDRCSSSG---NSKFVEEAKKKFQAIQEAY
+S------VLSDANKRFLYDVGAYDS--------DDDENGMGDFLNEMAVMMSQTKSNENG
+--KESFEELQ------ELFEDMFQRDV--DA----------FNSASHH------------
+----PMNSFPSSTS------------------TSSYCESSN--------ANNKRNSA-EM
+GSGRMMSAGESSAFDAHF------QSFCFG-T-----------GGTPGRFQEGE-RSKRR
+NSRRSQR---------------------------------
+>gnl_Selmo1.0_PACid_15401289
+---M----------------------------------------------------EKRK
+EDPYTVLGVQKSSSSSEIRSAYRKLAMKWHPDK--------QHSLEDQAKAKFQGIQEAY
+S------VLSDDKKRVLYDSGLYDEG------DDE-------------------------
+------------------------------------------------------------
+------------------------------------------------------------
+-------------------------------VS---------------------------
+----------------------------------------
+>gnl_Orysa6.0_PACid_16864430
+---MARGGG-----------------------------------G----------GGGAD
+ADLYAVLGLSRECTDADLRLAYRKLAMIWHPDRCSVAGGSASAAGVDEAKERFQEIQGAY
+S------VLSDSNKRFLYDVGVYDGNDGDDDDDEADLSGMGDFLGEMAQMMSQATP----
+--AESFEELQ------QLFVDMFQDDI--DAG---------LCQSTP-------------
+----PPPSWPSPPA-------------------AANARSPAAAAT-SRKGVNKRCSP-AA
+MDMD-----SGLSSLLGI------SGFCFE-AP--WTSQDASTAAGGG-------GGKRR
+KQRPPPA---SHNV--------------------------
+>gnl_Sorbi1.4_PACid_1982925
+---MAATSH-----------------------------------CGNIQDQDEEASAPGA
+ADLYAVLGLNRECTDAELRVAYRRLAMIWHPDRCSASG--SSPARMEEAKERFQEIQGAY
+S------VLSDSNKRLLYDVGVYDSDD-----DEADLSGMGDFLGEMADMMSQATP----
+--TETFEELQ------QVFVDMFQDDLD-DAG---------FFGGLPT-TGRRAQA--PS
+TSLPPSVSSSPLRP----------------TPAAGRSKGPQATPSSSFKGVERRGST-ST
+AKRPRPNGSAGLESDLGL------SGFCFM-VS--KEMSKSKERQAV---WASD-DGDRS
+TDGKQRLST-SRDVSGGG-MSRSLQGQSSKNLLQCMASKS
+>gnl_Medtr3.5_Medtr8g022310.3
+---MANE-------------------------------------------------GNKS
+NDFYAVLGLNKECSDSELRNAYKKLALKWHPDRCSASG---NVKFVEEAKKKFQAIQEAY
+S------VLSDSNKRLMYDVGVYDS--------DDDENVRHLF-----------------
+---HTIHELG------TLFCVMFCFFISLR------------GE----------------
+---------KRSNL------------------NLTFSLSH--------------------
+------------------------------------------------------------
+----------------------------------------
+>gnl_Nelnu1.0_NNU_000115-RA
+---MEVD------------------------------------------------SHRSS
+PSYYTILGVDQNSSASEIRNAYRKLAMQWHPDKWTKTP-----SLLEKAKSKFQQIQEAY
+SGGLLVFMLSDQGKRTLYDVGLYDPDD-----ETNDEVGLRRF--HAGDDISHERC----
+--EETGEEIQLGGTTGDVSGNVTRAGV--EDGECWWCVVVRWSCSLKE------------
+----------------------------------------------------------EL
+KEGQ--------------------MGIISE-SD--DA-----------------------
+----------GHDTPSLPHLHGSEL-----ELLGRTGCCN
+>contig_7
+------------------------------------------------------------
+------------------------------------------------------------
+----------------------------------ENEWSGAEFLNEMAAMMTQNKSNENG
+--TGTFEELQ------QLFDEMFQSDI--ES----------FNGCSSS------------
+----SNETCS---------------------------------------NSNKRNSI-ES
+SSAN----------------FRPENGNESG-----------------------E-ISGKK
+NTRKGKGDX-------------------------------