Mercurial > repos > greg > plant_tribes_kaks_analysis

changeset 7:2c46551274d6 draft default tip

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Uploaded
author greg
date Tue, 15 Nov 2022 20:45:29 +0000
parents 84615d553d44
children
files kaks_analysis.xml plant_tribes_scaffolds.loc.sample tool-data/plant_tribes_scaffolds.loc.sample tool_data_table_conf.xml.test
diffstat 4 files changed, 12 insertions(+), 6 deletions(-) [+]
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line diff
--- a/kaks_analysis.xml	Tue Sep 04 08:57:46 2018 -0400
+++ b/kaks_analysis.xml	Tue Nov 15 20:45:29 2022 +0000
@@ -1,10 +1,10 @@
-<tool id="plant_tribes_kaks_analysis" name="KaKsAnalysis" version="@WRAPPER_VERSION@.3.0">
+<tool id="plant_tribes_kaks_analysis" name="KaKsAnalysis" version="@WRAPPER_VERSION@.4.0">
     <description>estimates paralogous and orthologous pairwise synonymous (Ks) and non-synonymous (Ka) substitution rates</description>
     <macros>
         <import>macros.xml</import>
     </macros>
     <requirements>
-        <requirement type="package" version="1.0.3">plant_tribes_kaks_analysis</requirement>
+        <requirement type="package" version="1.0.4">plant_tribes_kaks_analysis</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
 #set output_dir = 'kaksAnalysis_dir'
--- a/plant_tribes_scaffolds.loc.sample	Tue Sep 04 08:57:46 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,4 +0,0 @@
-## Plant Tribes scaffolds
-#Value	Name	Path	Description
-#22Gv1.0	22Gv1.0	/plant_tribes/scaffolds/22Gv1.0	22 plant genomes (Angiosperms clusters, version 1.0; 22Gv1.0)
-#22Gv1.1	22Gv1.1	/plant_tribes/scaffolds/22Gv1.1	22 plant genomes (Angiosperms clusters, version 1.1; 22Gv1.1)
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/plant_tribes_scaffolds.loc.sample	Tue Nov 15 20:45:29 2022 +0000
@@ -0,0 +1,4 @@
+## Plant Tribes scaffolds
+#Value	Name	Path	Description
+#22Gv1.0	22Gv1.0	/plant_tribes/scaffolds/22Gv1.0	22 plant genomes (Angiosperms clusters, version 1.0; 22Gv1.0)
+#22Gv1.1	22Gv1.1	/plant_tribes/scaffolds/22Gv1.1	22 plant genomes (Angiosperms clusters, version 1.1; 22Gv1.1)
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.test	Tue Nov 15 20:45:29 2022 +0000
@@ -0,0 +1,6 @@
+<tables>
+    <table name="plant_tribes_scaffolds" comment_char="#">
+        <columns>value, name, path, description</columns>
+        <file path="${__HERE__}/test-data/plant_tribes_scaffolds.loc" />
+    </table>
+</tables>