Mercurial > repos > greg > quast

annotate test-data/reference.fna @ 0:5367786dc871 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Tue, 14 Mar 2023 15:21:14 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
5367786dc871 Uploaded
greg
parents:
diff changeset
1 >NC_000913.3:1-6650
5367786dc871 Uploaded
greg
parents:
diff changeset
2 AGCTTTTCATTCTGACTGCAACGGGCAATATGTCTCTGTGTGGATTAAAAAAAGAGTGTC
5367786dc871 Uploaded
greg
parents:
diff changeset
3 TGATAGCAGCTTCTGAACTGGTTACCTGCCGTGAGTAAATTAAAATTTTATTGACTTAGG
5367786dc871 Uploaded
greg
parents:
diff changeset
4 TCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGTAC
5367786dc871 Uploaded
greg
parents:
diff changeset
5 ACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGT
5367786dc871 Uploaded
greg
parents:
diff changeset
6 AACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGG
5367786dc871 Uploaded
greg
parents:
diff changeset
7 CTTTTTTTTTCGACCAAAGGTAACGAGGTAACAACCATGCGAGTGTTGAAGTTCGGCGGT
5367786dc871 Uploaded
greg
parents:
diff changeset
8 ACATCAGTGGCAAATGCAGAACGTTTTCTGCGTGTTGCCGATATTCTGGAAAGCAATGCC
5367786dc871 Uploaded
greg
parents:
diff changeset
9 AGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTG
5367786dc871 Uploaded
greg
parents:
diff changeset
10 GCGATGATTGAAAAAACCATTAGCGGCCAGGATGCTTTACCCAATATCAGCGATGCCGAA
5367786dc871 Uploaded
greg
parents:
diff changeset
11 CGTATTTTTGCCGAACTTTTGACGGGACTCGCCGCCGCCCAGCCGGGGTTCCCGCTGGCG
5367786dc871 Uploaded
greg
parents:
diff changeset
12 CAATTGAAAACTTTCGTCGATCAGGAATTTGCCCAAATAAAACATGTCCTGCATGGCATT
5367786dc871 Uploaded
greg
parents:
diff changeset
13 AGTTTGTTGGGGCAGTGCCCGGATAGCATCAACGCTGCGCTGATTTGCCGTGGCGAGAAA
5367786dc871 Uploaded
greg
parents:
diff changeset
14 ATGTCGATCGCCATTATGGCCGGCGTATTAGAAGCGCGCGGTCACAACGTTACTGTTATC
5367786dc871 Uploaded
greg
parents:
diff changeset
15 GATCCGGTCGAAAAACTGCTGGCAGTGGGGCATTACCTCGAATCTACCGTCGATATTGCT
5367786dc871 Uploaded
greg
parents:
diff changeset
16 GAGTCCACCCGCCGTATTGCGGCAAGCCGCATTCCGGCTGATCACATGGTGCTGATGGCA
5367786dc871 Uploaded
greg
parents:
diff changeset
17 GGTTTCACCGCCGGTAATGAAAAAGGCGAACTGGTGGTGCTTGGACGCAACGGTTCCGAC
5367786dc871 Uploaded
greg
parents:
diff changeset
18 TACTCTGCTGCGGTGCTGGCTGCCTGTTTACGCGCCGATTGTTGCGAGATTTGGACGGAC
5367786dc871 Uploaded
greg
parents:
diff changeset
19 GTTGACGGGGTCTATACCTGCGACCCGCGTCAGGTGCCCGATGCGAGGTTGTTGAAGTCG
5367786dc871 Uploaded
greg
parents:
diff changeset
20 ATGTCCTACCAGGAAGCGATGGAGCTTTCCTACTTCGGCGCTAAAGTTCTTCACCCCCGC
5367786dc871 Uploaded
greg
parents:
diff changeset
21 ACCATTACCCCCATCGCCCAGTTCCAGATCCCTTGCCTGATTAAAAATACCGGAAATCCT
5367786dc871 Uploaded
greg
parents:
diff changeset
22 CAAGCACCAGGTACGCTCATTGGTGCCAGCCGTGATGAAGACGAATTACCGGTCAAGGGC
5367786dc871 Uploaded
greg
parents:
diff changeset
23 ATTTCCAATCTGAATAACATGGCAATGTTCAGCGTTTCTGGTCCGGGGATGAAAGGGATG
5367786dc871 Uploaded
greg
parents:
diff changeset
24 GTCGGCATGGCGGCGCGCGTCTTTGCAGCGATGTCACGCGCCCGTATTTCCGTGGTGCTG
5367786dc871 Uploaded
greg
parents:
diff changeset
25 ATTACGCAATCATCTTCCGAATACAGCATCAGTTTCTGCGTTCCACAAAGCGACTGTGTG
5367786dc871 Uploaded
greg
parents:
diff changeset
26 CGAGCTGAACGGGCAATGCAGGAAGAGTTCTACCTGGAACTGAAAGAAGGCTTACTGGAG
5367786dc871 Uploaded
greg
parents:
diff changeset
27 CCGCTGGCAGTGACGGAACGGCTGGCCATTATCTCGGTGGTAGGTGATGGTATGCGCACC
5367786dc871 Uploaded
greg
parents:
diff changeset
28 TTGCGTGGGATCTCGGCGAAATTCTTTGCCGCACTGGCCCGCGCCAATATCAACATTGTC
5367786dc871 Uploaded
greg
parents:
diff changeset
29 GCCATTGCTCAGGGATCTTCTGAACGCTCAATCTCTGTCGTGGTAAATAACGATGATGCG
5367786dc871 Uploaded
greg
parents:
diff changeset
30 ACCACTGGCGTGCGCGTTACTCATCAGATGCTGTTCAATACCGATCAGGTTATCGAAGTG
5367786dc871 Uploaded
greg
parents:
diff changeset
31 TTTGTGATTGGCGTCGGTGGCGTTGGCGGTGCGCTGCTGGAGCAACTGAAGCGTCAGCAA
5367786dc871 Uploaded
greg
parents:
diff changeset
32 AGCTGGCTGAAGAATAAACATATCGACTTACGTGTCTGCGGTGTTGCCAACTCGAAGGCT
5367786dc871 Uploaded
greg
parents:
diff changeset
33 CTGCTCACCAATGTACATGGCCTTAATCTGGAAAACTGGCAGGAAGAACTGGCGCAAGCC
5367786dc871 Uploaded
greg
parents:
diff changeset
34 AAAGAGCCGTTTAATCTCGGGCGCTTAATTCGCCTCGTGAAAGAATATCATCTGCTGAAC
5367786dc871 Uploaded
greg
parents:
diff changeset
35 CCGGTCATTGTTGACTGCACTTCCAGCCAGGCAGTGGCGGATCAATATGCCGACTTCCTG
5367786dc871 Uploaded
greg
parents:
diff changeset
36 CGCGAAGGTTTCCACGTTGTCACGCCGAACAAAAAGGCCAACACCTCGTCGATGGATTAC
5367786dc871 Uploaded
greg
parents:
diff changeset
37 TACCATCAGTTGCGTTATGCGGCGGAAAAATCGCGGCGTAAATTCCTCTATGACACCAAC
5367786dc871 Uploaded
greg
parents:
diff changeset
38 GTTGGGGCTGGATTACCGGTTATTGAGAACCTGCAAAATCTGCTCAATGCAGGTGATGAA
5367786dc871 Uploaded
greg
parents:
diff changeset
39 TTGATGAAGTTCTCCGGCATTCTTTCTGGTTCGCTTTCTTATATCTTCGGCAAGTTAGAC
5367786dc871 Uploaded
greg
parents:
diff changeset
40 GAAGGCATGAGTTTCTCCGAGGCGACCACGCTGGCGCGGGAAATGGGTTATACCGAACCG
5367786dc871 Uploaded
greg
parents:
diff changeset
41 GACCCGCGAGATGATCTTTCTGGTATGGATGTGGCGCGTAAACTATTGATTCTCGCTCGT
5367786dc871 Uploaded
greg
parents:
diff changeset
42 GAAACGGGACGTGAACTGGAGCTGGCGGATATTGAAATTGAACCTGTGCTGCCCGCAGAG
5367786dc871 Uploaded
greg
parents:
diff changeset
43 TTTAACGCCGAGGGTGATGTTGCCGCTTTTATGGCGAATCTGTCACAACTCGACGATCTC
5367786dc871 Uploaded
greg
parents:
diff changeset
44 TTTGCCGCGCGCGTGGCGAAGGCCCGTGATGAAGGAAAAGTTTTGCGCTATGTTGGCAAT
5367786dc871 Uploaded
greg
parents:
diff changeset
45 ATTGATGAAGATGGCGTCTGCCGCGTGAAGATTGCCGAAGTGGATGGTAATGATCCGCTG
5367786dc871 Uploaded
greg
parents:
diff changeset
46 TTCAAAGTGAAAAATGGCGAAAACGCCCTGGCCTTCTATAGCCACTATTATCAGCCGCTG
5367786dc871 Uploaded
greg
parents:
diff changeset
47 CCGTTGGTACTGCGCGGATATGGTGCGGGCAATGACGTTACAGCTGCCGGTGTCTTTGCT
5367786dc871 Uploaded
greg
parents:
diff changeset
48 GATCTGCTACGTACCCTCTCATGGAAGTTAGGAGTCTGACATGGTTAAAGTTTATGCCCC
5367786dc871 Uploaded
greg
parents:
diff changeset
49 GGCTTCCAGTGCCAATATGAGCGTCGGGTTTGATGTGCTCGGGGCGGCGGTGACACCTGT
5367786dc871 Uploaded
greg
parents:
diff changeset
50 TGATGGTGCATTGCTCGGAGATGTAGTCACGGTTGAGGCGGCAGAGACATTCAGTCTCAA
5367786dc871 Uploaded
greg
parents:
diff changeset
51 CAACCTCGGACGCTTTGCCGATAAGCTGCCGTCAGAACCACGGGAAAATATCGTTTATCA
5367786dc871 Uploaded
greg
parents:
diff changeset
52 GTGCTGGGAGCGTTTTTGCCAGGAACTGGGTAAGCAAATTCCAGTGGCGATGACCCTGGA
5367786dc871 Uploaded
greg
parents:
diff changeset
53 AAAGAATATGCCGATCGGTTCGGGCTTAGGCTCCAGTGCCTGTTCGGTGGTCGCGGCGCT
5367786dc871 Uploaded
greg
parents:
diff changeset
54 GATGGCGATGAATGAACACTGCGGCAAGCCGCTTAATGACACTCGTTTGCTGGCTTTGAT
5367786dc871 Uploaded
greg
parents:
diff changeset
55 GGGCGAGCTGGAAGGCCGTATCTCCGGCAGCATTCATTACGACAACGTGGCACCGTGTTT
5367786dc871 Uploaded
greg
parents:
diff changeset
56 TCTCGGTGGTATGCAGTTGATGATCGAAGAAAACGACATCATCAGCCAGCAAGTGCCAGG
5367786dc871 Uploaded
greg
parents:
diff changeset
57 GTTTGATGAGTGGCTGTGGGTGCTGGCGTATCCGGGGATTAAAGTCTCGACGGCAGAAGC
5367786dc871 Uploaded
greg
parents:
diff changeset
58 CAGGGCTATTTTACCGGCGCAGTATCGCCGCCAGGATTGCATTGCGCACGGGCGACATCT
5367786dc871 Uploaded
greg
parents:
diff changeset
59 GGCAGGCTTCATTCACGCCTGCTATTCCCGTCAGCCTGAGCTTGCCGCGAAGCTGATGAA
5367786dc871 Uploaded
greg
parents:
diff changeset
60 AGATGTTATCGCTGAACCCTACCGTGAACGGTTACTGCCAGGCTTCCGGCAGGCGCGGCA
5367786dc871 Uploaded
greg
parents:
diff changeset
61 GGCGGTCGCGGAAATCGGCGCGGTAGCGAGCGGTATCTCCGGCTCCGGCCCGACCTTGTT
5367786dc871 Uploaded
greg
parents:
diff changeset
62 CGCTCTGTGTGACAAGCCGGAAACCGCCCAGCGCGTTGCCGACTGGTTGGGTAAGAACTA
5367786dc871 Uploaded
greg
parents:
diff changeset
63 CCTGCAAAATCAGGAAGGTTTTGTTCATATTTGCCGGCTGGATACGGCGGGCGCACGAGT
5367786dc871 Uploaded
greg
parents:
diff changeset
64 ACTGGAAAACTAAATGAAACTCTACAATCTGAAAGATCACAACGAGCAGGTCAGCTTTGC
5367786dc871 Uploaded
greg
parents:
diff changeset
65 GCAAGCCGTAACCCAGGGGTTGGGCAAAAATCAGGGGCTGTTTTTTCCGCACGACCTGCC
5367786dc871 Uploaded
greg
parents:
diff changeset
66 GGAATTCAGCCTGACTGAAATTGATGAGATGCTGAAGCTGGATTTTGTCACCCGCAGTGC
5367786dc871 Uploaded
greg
parents:
diff changeset
67 GAAGATCCTCTCGGCGTTTATTGGTGATGAAATCCCACAGGAAATCCTGGAAGAGCGCGT
5367786dc871 Uploaded
greg
parents:
diff changeset
68 GCGCGCGGCGTTTGCCTTCCCGGCTCCGGTCGCCAATGTTGAAAGCGATGTCGGTTGTCT
5367786dc871 Uploaded
greg
parents:
diff changeset
69 GGAATTGTTCCACGGGCCAACGCTGGCATTTAAAGATTTCGGCGGTCGCTTTATGGCACA
5367786dc871 Uploaded
greg
parents:
diff changeset
70 AATGCTGACCCATATTGCGGGTGATAAGCCAGTGACCATTCTGACCGCGACCTCCGGTGA
5367786dc871 Uploaded
greg
parents:
diff changeset
71 TACCGGAGCGGCAGTGGCTCATGCTTTCTACGGTTTACCGAATGTGAAAGTGGTTATCCT
5367786dc871 Uploaded
greg
parents:
diff changeset
72 CTATCCACGAGGCAAAATCAGTCCACTGCAAGAAAAACTGTTCTGTACATTGGGCGGCAA
5367786dc871 Uploaded
greg
parents:
diff changeset
73 TATCGAAACTGTTGCCATCGACGGCGATTTCGATGCCTGTCAGGCGCTGGTGAAGCAGGC
5367786dc871 Uploaded
greg
parents:
diff changeset
74 GTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACAT
5367786dc871 Uploaded
greg
parents:
diff changeset
75 CAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGTTGCGCAGCTGCCGCAGGA
5367786dc871 Uploaded
greg
parents:
diff changeset
76 GACGCGCAACCAGCTGGTTGTCTCGGTGCCAAGCGGAAACTTCGGCGATTTGACGGCGGG
5367786dc871 Uploaded
greg
parents:
diff changeset
77 TCTGCTGGCGAAGTCACTCGGTCTGCCGGTGAAACGTTTTATTGCTGCGACCAACGTGAA
5367786dc871 Uploaded
greg
parents:
diff changeset
78 CGATACCGTGCCACGTTTCCTGCACGACGGTCAGTGGTCACCCAAAGCGACTCAGGCGAC
5367786dc871 Uploaded
greg
parents:
diff changeset
79 GTTATCCAACGCGATGGACGTGAGTCAGCCGAACAACTGGCCGCGTGTGGAAGAGTTGTT
5367786dc871 Uploaded
greg
parents:
diff changeset
80 CCGCCGCAAAATCTGGCAACTGAAAGAGCTGGGTTATGCAGCCGTGGATGATGAAACCAC
5367786dc871 Uploaded
greg
parents:
diff changeset
81 GCAACAGACAATGCGTGAGTTAAAAGAACTGGGCTACACTTCGGAGCCGCACGCTGCCGT
5367786dc871 Uploaded
greg
parents:
diff changeset
82 AGCTTATCGTGCGCTGCGTGATCAGTTGAATCCAGGCGAATATGGCTTGTTCCTCGGCAC
5367786dc871 Uploaded
greg
parents:
diff changeset
83 CGCGCATCCGGCGAAATTTAAAGAGAGCGTGGAAGCGATTCTCGGTGAAACGTTGGATCT
5367786dc871 Uploaded
greg
parents:
diff changeset
84 GCCAAAAGAGCTGGCAGAACGTGCTGATTTACCCTTGCTTTCACATAATCTGCCCGCCGA
5367786dc871 Uploaded
greg
parents:
diff changeset
85 TTTTGCTGCGTTGCGTAAATTGATGATGAATCATCAGTAAAATCTATTCATTATCTCAAT
5367786dc871 Uploaded
greg
parents:
diff changeset
86 CAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAGAAAAATG
5367786dc871 Uploaded
greg
parents:
diff changeset
87 ACAGGGAAAAAGGAGAAATTCTCAATAAATGCGGTAACTTAGAGATTAGGATTGCGGAGA
5367786dc871 Uploaded
greg
parents:
diff changeset
88 ATAACAACCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATA
5367786dc871 Uploaded
greg
parents:
diff changeset
89 AAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGT
5367786dc871 Uploaded
greg
parents:
diff changeset
90 CGCTCCCATGGCAGCACAGGCTGCGGAAATTACGTTAGTCCCGTCAGTAAAATTACAGAT
5367786dc871 Uploaded
greg
parents:
diff changeset
91 AGGCGATCGTGATAATCGTGGCTATTACTGGGATGGAGGTCACTGGCGCGACCACGGCTG
5367786dc871 Uploaded
greg
parents:
diff changeset
92 GTGGAAACAACATTATGAATGGCGAGGCAATCGCTGGCACCTACACGGACCGCCGCCACC
5367786dc871 Uploaded
greg
parents:
diff changeset
93 GCCGCGCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACA
5367786dc871 Uploaded
greg
parents:
diff changeset
94 TCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTG
5367786dc871 Uploaded
greg
parents:
diff changeset
95 GCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGG
5367786dc871 Uploaded
greg
parents:
diff changeset
96 CAGGATAAGGCGTTCACGCCGCATCCGGCATTGACTGCAAACTTAACGCTGCTCGTAGCG
5367786dc871 Uploaded
greg
parents:
diff changeset
97 TTTAAACACCAGTTCGCCATTGCTGGAGGAATCTTCATCAAAGAAGTAACCTTCGCTATT
5367786dc871 Uploaded
greg
parents:
diff changeset
98 AAAACCAGTCAGTTGCTCTGGTTTGGTCAGCCGATTTTCAATAATGAAACGACTCATCAG
5367786dc871 Uploaded
greg
parents:
diff changeset
99 ACCGCGTGCTTTCTTAGCGTAGAAGCTGATGATCTTAAATTTGCCGTTCTTCTCATCGAG
5367786dc871 Uploaded
greg
parents:
diff changeset
100 GAACACCGGCTTGATAATCTCGGCATTCAATTTCTTCGGCTTCACCGATTTAAAATACTC
5367786dc871 Uploaded
greg
parents:
diff changeset
101 ATCTGACGCCAGATTAATCACCACATTATCGCCTTGTGCTGCGAGCGCCTCGTTCAGCTT
5367786dc871 Uploaded
greg
parents:
diff changeset
102 GTTGGTGATGATATCTCCCCAGAATTGATACAGATCTTTCCCTCGGGCATTCTCAAGACG
5367786dc871 Uploaded
greg
parents:
diff changeset
103 GATCCCCATTTCCAGACGATAAGGCTGCATTAAATCGAGCGGGCGGAGTACGCCATACAA
5367786dc871 Uploaded
greg
parents:
diff changeset
104 GCCGGAAAGCATTCGCAAATGCTGTTGGGCAAAATCGAAATCGTCTTCGCTGAAGGTTTC
5367786dc871 Uploaded
greg
parents:
diff changeset
105 GGCCTGCAAGCCGGTGTAGACATCACCTTTAAACGCCAGAATCGCCTGGCGGGCATTCGC
5367786dc871 Uploaded
greg
parents:
diff changeset
106 CGGCGTGAAATCTGGCTGCCAGTCATGAAAGCGAGCGGCGTTGATACCCGCCAGTTTGTC
5367786dc871 Uploaded
greg
parents:
diff changeset
107 GCTGATGCGCATCAGCGTGCTAATCTGCGGAGGCGTCAGTTTCCGCGCCTCATGGATCAA
5367786dc871 Uploaded
greg
parents:
diff changeset
108 CTGCTGGGAATTGTCTAACAGCTCCGGCAGCGTATAGCGCGTGGTGGTCAACGGGCTTTG
5367786dc871 Uploaded
greg
parents:
diff changeset
109 GTAATCAAGCGTTTTCGCAGGTGAAATAAGAATCAGCATATCCAGTCCTTGCAGGAAATT
5367786dc871 Uploaded
greg
parents:
diff changeset
110 TATGCCGACTTTAGCAAAAAATGAGAATGAGTTGATCGATAGTTGTGATTACTCCTGCGA
5367786dc871 Uploaded
greg
parents:
diff changeset
111 AACATCATCCCACGCGTCCGGAGAAAGCTGGCGACCGATATCCGGATAACGCAATGGATC
5367786dc871 Uploaded
greg
parents:
diff changeset
112 AAACACCGGGCGCACGCCGAGTTTACGCTGGCGTAGATAATCACTGGCAA