Mercurial > repos > greg > validate_affy_metadata

comparison validate_affy_metadata.xml @ 1:b5f5c3d0f349 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author greg
date Fri, 13 Sep 2019 13:55:24 -0400
parents 80d672b3e6dd
children 9fce688a1e91
comparison
equal deleted inserted replaced
0:80d672b3e6dd 1:b5f5c3d0f349
4 python '$__tool_directory__/validate_affy_metadata.py' 4 python '$__tool_directory__/validate_affy_metadata.py'
5 --input '$input' 5 --input '$input'
6 --output '$output']]></command> 6 --output '$output']]></command>
7 <inputs> 7 <inputs>
8 <param name="input" type="data" format="tabular" label="Affymetrix 96 well plate metadata file"> 8 <param name="input" type="data" format="tabular" label="Affymetrix 96 well plate metadata file">
9 <validator type="expression" message="96 well plate data must have 32 columns and no more than 96 lines of data"><![CDATA[value is not None and value.metadata.columns==32 and value.metadata.data_lines<=96]]></validator> 9 <validator type="expression" message="96 well plate data must have 32 columns"><![CDATA[value is not None and value.metadata.columns==32]]></validator>
10 </param> 10 </param>
11 </inputs> 11 </inputs>
12 <outputs> 12 <outputs>
13 <data name="output" format="tabular"/> 13 <data name="output" format="tabular"/>
14 </outputs> 14 </outputs>
19 </test> 19 </test>
20 </tests> 20 </tests>
21 <help> 21 <help>
22 **What it does** 22 **What it does**
23 23
24 Validates an Affymetrix metadata file for 96 well plate data. These files consist of 32 columns and no more than 96 data lines. 24 Validates an Affymetrix metadata file for 96 well plate data consisting of 32 columns.
25 The tool will output the input file if it is valid. 25 The tool will output the input file if it is valid.
26 26
27 ----- 27 -----
28 28
29 **Columns** 29 **Columns**