Mercurial > repos > greg > vsnp_build_tables
annotate macros.xml @ 15:5be0576d2d5e draft
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_build_tables commit 4c7078b27931895d469b0e9663cc11a925eaf1bd"
| author | greg |
|---|---|
| date | Fri, 12 Nov 2021 16:10:08 +0000 |
| parents | 756e311e8efb |
| children | 940b3fbc320f |
| rev | line source |
|---|---|
| 3 | 1 <?xml version='1.0' encoding='UTF-8'?> |
| 2 <macros> | |
| 3 <token name="@WRAPPER_VERSION@">1.0</token> | |
| 12 | 4 <token name="@PROFILE@">20.09</token> |
| 5 <xml name="biopython_requirement"> | |
| 6 <requirement type="package" version="1.79">biopython</requirement> | |
| 7 </xml> | |
| 8 <xml name="numpy_requirement"> | |
| 9 <requirement type="package" version="1.21.1">numpy</requirement> | |
| 10 </xml> | |
| 11 <xml name="openpyxl_requirement"> | |
| 12 <requirement type="package" version="3.0.7">openpyxl</requirement> | |
| 13 </xml> | |
| 14 <xml name="pandas_requirement"> | |
| 15 <requirement type="package" version="1.3.0">pandas</requirement> | |
| 16 </xml> | |
| 17 <xml name="pysam_requirement"> | |
| 18 <requirement type="package" version="0.15.4">pysam</requirement> | |
| 19 </xml> | |
|
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756e311e8efb
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_build_tables commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
12
diff
changeset
|
20 <xml name="pyvcf_requirement"> |
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756e311e8efb
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_build_tables commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
12
diff
changeset
|
21 <requirement type="package" version="0.6.8">pyvcf</requirement> |
|
756e311e8efb
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_build_tables commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
12
diff
changeset
|
22 </xml> |
| 12 | 23 <xml name="pyyaml_requirement"> |
|
14
756e311e8efb
"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_build_tables commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
greg
parents:
12
diff
changeset
|
24 <requirement type="package" version="5.4.1">pyyaml</requirement> |
| 12 | 25 </xml> |
| 26 <xml name="xlrd_requirement"> | |
| 27 <requirement type="package" version="2.0.1">xlrd</requirement> | |
| 28 </xml> | |
| 29 <xml name="xlsxwriter_requirement"> | |
| 30 <requirement type="package" version="1.4.4">xlsxwriter</requirement> | |
| 31 </xml> | |
| 3 | 32 <xml name="param_reference_source"> |
| 33 <param name="reference_source" type="select" label="Choose the source for the reference genome"> | |
| 34 <option value="cached" selected="true">locally cached</option> | |
| 35 <option value="history">from history</option> | |
| 36 </param> | |
| 37 </xml> | |
| 38 <xml name="citations"> | |
| 39 <citations> | |
| 40 <citation type="bibtex"> | |
| 41 @misc{None, | |
| 42 journal = {None}, | |
| 43 author = {1. Stuber T}, | |
| 44 title = {Manuscript in preparation}, | |
| 45 year = {None}, | |
| 46 url = {https://github.com/USDA-VS/vSNP},} | |
| 47 </citation> | |
| 48 </citations> | |
| 49 </xml> | |
| 50 </macros> | |
| 51 |