Mercurial > repos > greg > vsnp_determine_ref_from_data

annotate macros.xml @ 11:04630cab5d2b draft default tip

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"planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_determine_ref_from_data commit 7f5ebaad2e650c53a8980e8567fe9943f9ccabb6"
author greg
date Mon, 15 Nov 2021 23:14:10 +0000
parents 4a96d885670d
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1 <?xml version='1.0' encoding='UTF-8'?>
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2 <macros>
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3 <token name="@WRAPPER_VERSION@">1.0</token>
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4 <token name="@PROFILE@">20.09</token>
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5 <xml name="biopython_requirement">
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6 <requirement type="package" version="1.79">biopython</requirement>
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7 </xml>
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8 <xml name="numpy_requirement">
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9 <requirement type="package" version="1.21.1">numpy</requirement>
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10 </xml>
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11 <xml name="openpyxl_requirement">
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04630cab5d2b "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_determine_ref_from_data commit 7f5ebaad2e650c53a8980e8567fe9943f9ccabb6"
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12 <requirement type="package" version="3.0.9">openpyxl</requirement>
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13 </xml>
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14 <xml name="pandas_requirement">
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15 <requirement type="package" version="1.3.0">pandas</requirement>
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16 </xml>
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17 <xml name="pysam_requirement">
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18 <requirement type="package" version="0.15.4">pysam</requirement>
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19 </xml>
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4a96d885670d "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_determine_ref_from_data commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
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20 <xml name="pyvcf_requirement">
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21 <requirement type="package" version="0.6.8">pyvcf</requirement>
4a96d885670d "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_determine_ref_from_data commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
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22 </xml>
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23 <xml name="pyyaml_requirement">
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4a96d885670d "planemo upload for repository https://github.com/gregvonkuster/galaxy_tools/tree/master/tools/sequence_analysis/vsnp/vsnp_determine_ref_from_data commit 60f0060645f11d67acb4c0941c61eb21d4b12042"
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24 <requirement type="package" version="5.4.1">pyyaml</requirement>
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25 </xml>
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26 <xml name="xlrd_requirement">
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27 <requirement type="package" version="2.0.1">xlrd</requirement>
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28 </xml>
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29 <xml name="xlsxwriter_requirement">
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30 <requirement type="package" version="1.4.4">xlsxwriter</requirement>
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31 </xml>
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32 <xml name="param_reference_source">
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33 <param name="reference_source" type="select" label="Choose the source for the reference genome">
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34 <option value="cached" selected="true">locally cached</option>
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35 <option value="history">from history</option>
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36 </param>
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37 </xml>
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38 <xml name="citations">
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39 <citations>
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40 <citation type="bibtex">
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41 @misc{None,
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42 journal = {None},
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43 author = {1. Stuber T},
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44 title = {Manuscript in preparation},
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45 year = {None},
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46 url = {https://github.com/USDA-VS/vSNP},}
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47 </citation>
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48 </citations>
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49 </xml>
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50 </macros>
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