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view test-data/all_vcf3.fasta @ 6:49aceeefab0a draft

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author greg
date Fri, 18 Jun 2021 18:12:16 +0000
parents da20c7c76d06
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>01_1787_FL_Zoo_Jaguar_vcf
ATCTTGTGCACAGCCGGCGTCGTGTGACTATGTGCGATCTACGTGAGACTCTTGGCGGTTCGGATCAGTCCATTATGGCCACTTCATGGGGTCAAAACTACGCGGCTAAGCTCAACCAGATTGAGCACGGTGCGCGAACGCCCGATGAGCCACCGTCTCGAAGGGCAAAATAGTCCCCCATTGGCACGCGTCGCCCGCAGGGTACGTTTGTCGTCAATACCACCACTAACACCAAATTAGCACCTTCGAGGAGGCGTGGTAGGAGGTTGGTCACCCCATACCGTAAACAACGCTTTCGCAAGCACACGGACCCGTGCGTCATACAGGCTTAGGACATGGTCTACATACGGCCGTGCCAGGCAACGGTTGGTAATTTAACATACCGGAGAACACTCTCCCTTGCGGGGAACGACCTGCAGAGCCCGTAGTGACAGACCAGGCTCCGACTATTGGCAAAGTGTATTCTGAAGGCGACATTGAGTTTAGTTCGAATAGAGCCAGCGGTGTACGTCCAGCAATAGCTGAAATCCGAGGCAAATGGTTACAGTAGAATCCAATCTAACGTGGCATACGGCCACAGACTGACTAGGGGCTTTGGCTGGGGAACGAAATGTGTGATGACTTGCGGTATGGAGAGGGATCCGACCCGGTTCAGTAACAAGTGGTCGTTCGCAGCGCGCTGCTATTTCCTGGACATGACACCTCTCCTCCACTGCGCAGCCTCTAAGGTAGTCCCTTGCGGCGCCCATTTTGACCCCACTATATCACAGCGTCTTCACTCTGCGCTACGTCC
>BCG_Pasteur_Unknown_FR_SRR8886989_vcf
GTNCCTNATGNGATTAATGCAGCACTNTGATGGATACTATNNCCNATNTCTCCGGCCGC-NAACCGCCTATATNGCGCGGGGTCTGCTTGCGCNGCNGCGGATNCGCGGCNNNNTNTCGNGAAGCTGGGACCTGATGGNACCCCCCNGCCN-NAANTCTAGTCTTTNCNGCGCCCNNNTGGCNAGTTGACCT-TCTGTGNNGTNTACCCATTTCTGACGCGGNNGCNGGCGCCNNGNCGATGACGCT-GGCCNATCCCACCNANAGTCAACNGNCTCGNGNTACGNCCGGAGACCTGNAGGACGANGACCTTCANGAGNGCTAGGAGTCGGAGGTNNTACGTGTGCGTTTTTCCAGGGAACGATTACNAGCGGNTNGGTGCNTTCGNNGGCGTNTCGNTCNACTCCACGAACTAC-TGTGAATNAGGNCAGTGAGTAGGGTCCTAGGGGCCAATNAGGGGGGTTCTGAGACTACTGACTGAGCGGACCANAGCNAATNAGAAANAGGCTNCTTGTGGGGGCYCAAGGCANAAAANGAGC-ACCGTGNTNGAANCTCNCGCNGCAGACTGCGCAGTTGGGGGTTAGGTGNAAATCNCGGGCACAANGTGTGGGGCATGACCGACCAT-GCGCNGCAAGAGGCATAGTTTGTCTNGGCCGTGTAGTG--GTCTACCACGGNTNAGCACCCATTNNNTGCAGNGNTCCCNNTTCCGCACTAGGAGCACCGATCGTCNTCNCATACCATTTAGCCTCAACTCATCACAATNAGNTTCTNTTGTCACAACNCCNANGT
>02_0585_COA_TX_Fed_vcf
ATCTTGTGCGCAGCCGGCGTCATGTGACTGCATGCGATCTACGTGGGACTCTTGGTGGCTCGGATCAGGCCGTTGTGCCCACCTCATGGTGTTAAAACTACGCGGCTAAGCTCAACCAAATTGGGCACAGTCCGCTAACACATCATGACTCGCCGTCTCGGAGGGTACAATAGTTCCCCATTGGCACACGTCGCTCGCAGGGCACGTTTGCTGTTAATATCACCATTAACAATAAATTGGCACCTCCGAGGAGGCGTGGTAGGAGGTCGGCCACTCCATACCGTAAATGACGCTTTCGCAAGCAAACGGACTTATTCCTCATGCAGACTTAGGACATGGTCTACATACGTCCGTGCCAAGCAACGGTTGGTAATTTAACACACCGGAGAGAATTCTCCCTTGTGGGGAAAGACCTGCGGAGCCCGTGGTGACAGACCATTCTACGACTATTAGCAGAATATATTCTGAAGGCGACATTGAGGTTAGCCAGGACAGAGCCAGCGGTATACGCCCAGGAATAGCTGAAGTCCGGGGCAGATGGTCACAGTAGTCTTCAATCTAACGTGGTACACGGCCAGGAGCTGACTAGGGGCTTCGAGTGGGGAACAAAATGTGTAATGACTTGCGGCACGAAGGGGGGCCCGACCCAGCCCAATAACAAATGATCACCCGTAGACCGCTGCTGTTTCCGGGACATGACACCTTTCCTCCAGTGCGCAGACTATAAGGTAGTCCCTTGCAGGGCTCCGCTTGACCCGGTTATGTCACAGCGTCTTCACTCTGCGCTACGTCC
>BCG_Tokyo_Unknown_JP_DRR029468_vcf
GTGCCTCATGAGATTAATGCAGCACTCTGATGGATACTATCTCCCATGTCCCCCGCCGCCAAACCGCCTATATCGCGCGGGGTCTGCTTGCGCGGCGGCGGATACGCGGCACTGTTTCGAGAAGCTGGGACCTGATGGTACCCCCCAGCCT-TAATTCTAGTCTTTGCCGCGCCCCTCTGTCGAGTTGACCTGTCTACGTATTGTACCCATTTCTGACGCGGCTGCCGGCGCCGGGCCGATGACGCTAGGCCAATCCCACCAAGATCCAACCGTCTAGTGTTACGACCGGAGACCCGAAGGAAGAAGACCTTCACGAGGGCTAGGAGCCGGAGGTGCTACGCGTACGTTTTTCCAGGGAACGGTTACGGTCGGTTCGGTGCGTTCGGAGGCGTCTCGTTCTACTCCACGAACTACGTGTGAATTAGGACAGTGAGCAGGGTCCTAGGGGCCAATGAGGGGGGTTCTGAGGCTACTGACTGAGCGGACCAAAGCAGGTCAGAAAGAGGCTCCTTGTGGGGGCTCAGGGCACAAAGGGAGCAACCGTGAGGGAACCTCGCGCGGTAGACTGCGCAATTGGGGGTCAGGTGCAAACCGCGGGCAGAAGGTGAGGGATACGACCAACCATAGCGCAGCAAGAGGCATAGTTTGTCTGGGCCGTGTAGTG--GTCTACCACGGGCCAGTACCCANTTTATGCAGCGGCCCCTTGTCCGCATGAGGAGCATCGATCGTCCTCCCATACCATTCAGCCCCGATTCATCGCAATCAGATTCTTCTGCCACAACTCCGATGT
>02_5877_MEX_TX_Fed_vcf
ACCTTGTGCGCAGCCGGCATCATGTGACTACATGCGACCCACGTGGGACTCTTGACGACTCGGATCAGTCCAATGTACCCACCTCATGGTGTCAAAACTACGCGGCTAAGCTCAACCAAATTGGGCACGGTCCTCTAACATACCATGACTCGCCGTCTCGGAGGGTACAATAGTTCCCCATTGGCACGCGTCGCTCGCAGGGCACGTTTGTTGTTACTACCACCATTAATACTAAATTGGCACGTCCGAAGAGGCGTGGTAGGAGGTCGGCCACTCCATACCGTAAATGACTCTTTCGCAAGCAAACGGACTCATGCCTCACGCAGACTTAGCACATGGTCTACATACGTCCGTGCCAAGGAACGGTTGGTAATCTAACACACCGAAGAGAATTCTCCCTTGCGGGGAAAGACCTACGGAGCCCGTGGTGACAGACCATTCTCCGACTATTAGCAGAATGTACCTCAGAGGCGACATTGAGGTTAGCCAGAACAGAGCCAGCGGTATACGCCCAGGAATAGCTGAAGTCCGAGGCAGATGGTCACAGTAATCTTCAATCTAACGTGGTACATGGCCAGGGGCTGACCAGGGGCTTCAGGTGGGGAACGAAATGTGTACTGACTTGCGACACGGAGGAGAGCCCGACCCGGCCCAGTAACAAATGACCACCCGTAGACCGCTGCTATTTCCGGGACATGACACCTCTCCTCTAGTGCGCATACTATAAGGTAGTCCTTTGCAGCGCTCAGCTTGACCCCATTATATCACAGCGTCTTCACTCTGCGCTACGTCC
>root
ATCTTTTGCGCAGCCGGCGCCGTGTGACTATGGGCGATCTACGTGAGACCCCTGGCGGCTCGGATCACTCCATTGTGCCCACTTCGTGGGGTCAAAACTACGCGGGTGACCTCAACCCGGTTGGCCGCGGTCCGCTAACACCCCATGACCCGCCGCTTCGGAGGGTACAGCAGTCGCTCATTAGCACGCGTCACCCGCAGGGTACATCCGTTGTTAACACCATCGCTAACACCAAATTGGCACCTCCGGGCAGGCCTCATCGGAGGTCGGCGGCCTCGCACCGCAGACGGCGCCCTCGCAAGCAACCGGACTCATGCGTCATACAGGCTTAGGACATGGTCTACATACGTCCGTGCCAAGCAATGGTTGGTAACTTAACACACCGGAGGGCATTCCCCCTGGCGCCGATAGACATGTGGAGCCCGTGGTGGCAGACCAGGTTCTGGCTGTCAACAAGGTGTATTCTGAAGCCGACATTGAAGTTAGCCAGAACCGAGTCAACGATGTACGCCCAGGAAGAGCTGAAGTCTAAGGCAAATGGTCACAGTAGAATCCAATCTAGCGTGGTACACGGCCGGGGGCTGACTAGGGGCTTCGGGTGGGGAGCGAAATGTGTGATGACTTACGGCGCGGAGAGAGGCCCGGCCCGGCTCAGTAACAAATGGTTGTCCGCAGCGCTCTGCCATTTCCTGGGCATGATACCTCTCCTCCAGTGCGCAGACCATAAGGCGGTTCCTTGCAGCGCTCAGCCTGAACCCATTATATCACAGCGCCGTTACTCTGCGCTACGCGC