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comparison test-data/vsnp_statistics.tabular @ 0:c21d338dbdc4 draft

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author greg
date Tue, 21 Apr 2020 10:19:53 -0400
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-1:000000000000 0:c21d338dbdc4
1 Sample 13-1941-6
2 Reference 89
3 Read1 File 13-1941-6_S4_L001_R1_600000_fastq_gz
4 Read1 File Size 5.1 KB
5 Read1 Total Reads 25
6 Read1 Mean Read Length 230.6
7 Read1 Mean Read Quality 30.8
8 Read1 Reads Passing Q30 60.0%
9 Read2 File 13-1941-6_S4_L001_R2_600000_fastq_gz
10 Read2 File Size 5.6 KB
11 Read2 Total Reads 25
12 Read2 Mean Read Length 239.7
13 Read2 Mean Read Quality 22.2
14 Read2 Reads Passing Q30 4.0%
15 Total Reads 50
16 All Mapped Reads 45
17 Unmapped Reads 5
18 Unmapped Reads Percentage of Total 10.0%
19 Average Depth of Coverage 10.338671
20 Reference with Coverage 98.74%
21
22 Good SNP Count 611