Mercurial > repos > gregor.m > spyboat

comparison run_tests.sh @ 4:a4c6fcf2c456 draft

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"planemo upload commit 0584e8878deaf91614c6bb3c0122975300132c25"
author gregor.m
date Thu, 26 Nov 2020 16:40:47 +0000
parents 4d7f30a7e2f6
children d5a4180410c4
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3:4d7f30a7e2f6 4:a4c6fcf2c456
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4 INPUT_PATH='./test-data/test-movie.tif' 4 INPUT_PATH='./test-data/test-movie.tif'
5 SCRIPT_PATH='.' 5 SCRIPT_PATH='.'
6 6
7 python3 $SCRIPT_PATH/spyboat_cli.py --input_path $INPUT_PATH --phase_out phase_twosines_out.tif --period_out period_twosines_out.tif --power_out power_twosines_out.tif --amplitude_out amplitude_twosines_out.tif --dt 1 --Tmin 2 --Tmax 30 --nT 200 --ncpu 6 --masking dynamic --preprocessed_out preproc_two_sines.tif --gauss_sigma 3 --rescale 80 --Tcutoff 40 --masking static --mask_frame 10 --mask_thresh 8 7 python3 $SCRIPT_PATH/spyboat_cli.py --input_path $INPUT_PATH --phase_out phase_test-movie.tif --period_out period_test-movie.tif --power_out power_test-movie.tif --amplitude_out amplitude_test-movie.tif --dt 1 --Tmin 20 --Tmax 30 --nT 200 --ncpu 6 --masking dynamic --preprocessed_out preproc_two_sines.tif --gauss_sigma 2 --rescale 80 --Tcutoff 40 --masking static --mask_frame 10 --mask_thresh 300
8 8
9 printf "\n" 9 printf "\n"
10 # printf "\nError examples:\n" 10 # printf "\nError examples:\n"
11 11
12 # python3 $SCRIPT_PATH/cl_wrapper.py --input_path $INPUT_PATH --phase_out phase_twosines_out.tif --period_out period_twosines_out.tif --power_out power_twosines_out.tif --amplitude_out amplitude_twosines_out.tif --dt 2. --Tmin 20 --Tmax 30 --nT 200 --ncpu 6 --save_input True --masking fixed