<tool id="dbkit_extract" name="DBKit Extract" version="0.1.1" python_template_version="3.5" license="MIT">
    <description>entries</description>
    <command detect_errors="exit_code"><![CDATA[
        python3 '$__tool_directory__/dbkit_extract.py' -l '$list' -d '$database' -i '$index' -oi '$outindex' -od '$outdata' -g '$logfile'
    ]]></command>
    <inputs>
        <param format="tabular" name="list" type="data" label="List of entries" help="Select a tabular file containing the entries to be extracted."/>    
        <param format="ffindex" name="index" type="data" label="Database Index" help="Select the index file of the database (ffindex)."/>    
        <param format="ffdata" name="database" type="data" label="Database Content" help="Select the data file of the database (ffdata)."/>
    </inputs>
    <outputs>
        <data format="ffindex" name="outindex" label="DBKit Extracted Index" />
        <data format="ffdata" name="outdata" label="DBKit Extraced Database" />
        <data format="txt" name="logfile" label="DBKit Extraced Log" />
    </outputs>
    <tests>
        <test> 
            <param name="list" value="create/pdb.tabular" />
            <param name="index" value="merge/result.ffindex" />
            <param name="database" value="merge/result.ffdata" />
            <output name="outindex" file="merge/second.ffindex" />
            <output name="outdatabase" file="merge/second.ffdata" />
        </test>
    </tests>
    <help><![CDATA[
This database creation tool merges two pairs of ffindex/ffdata entries into a single ffindex/ffdata pair.
    ]]></help>
</tool>