Mercurial > repos > guerler > spring_model_all
comparison macros.xml @ 1:e56e0f4c84fb draft
"planemo upload commit aa6c4b1d15a2d5361d68c7eb313551bddf2700fa"
author | guerler |
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date | Mon, 29 Mar 2021 21:50:37 +0000 |
parents | 64cb5fab9c60 |
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0:64cb5fab9c60 | 1:e56e0f4c84fb |
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3 <requirements> | 3 <requirements> |
4 <requirement type="package" version="@TOOL_VERSION@">springsuite</requirement> | 4 <requirement type="package" version="@TOOL_VERSION@">springsuite</requirement> |
5 <yield /> | 5 <yield /> |
6 </requirements> | 6 </requirements> |
7 </xml> | 7 </xml> |
8 <token name="@TOOL_VERSION@">0.1</token> | 8 <token name="@TOOL_VERSION@">0.2</token> |
9 <token name="@VERSION_SUFFIX@">0</token> | 9 <token name="@VERSION_SUFFIX@">0</token> |
10 | 10 |
11 <xml name="ffindex_single_inputs"> | 11 <xml name="ffindex_single_inputs"> |
12 <param name="ffdata" type="data" format="ffdata" label="PDB Database" help="Database Data file." /> | 12 <param name="ffdata" type="data" format="ffdata" label="PDB Database" help="Database Data file." /> |
13 <param name="ffindex" type="data" format="ffindex" label="PDB Database Index" help="Database Index file." /> | 13 <param name="ffindex" type="data" format="ffindex" label="PDB Database Index" help="Database Index file." /> |
39 <filter type="sort_by" column="0" /> | 39 <filter type="sort_by" column="0" /> |
40 <filter type="static_value" column="3" value="pdb" /> | 40 <filter type="static_value" column="3" value="pdb" /> |
41 <validator type="no_options" message="No indices are available" /> | 41 <validator type="no_options" message="No indices are available" /> |
42 </options> | 42 </options> |
43 </param> | 43 </param> |
44 <param name="zipped" type="select" label="Zipped entries in PDB database?" help=""> | |
45 <option value="" selected="true">No</option> | |
46 <option value="gz">Yes</option> | |
47 </param> | |
44 </when> | 48 </when> |
45 <when value="history"> | 49 <when value="history"> |
46 <expand macro="ffindex_single_inputs" /> | 50 <expand macro="ffindex_single_inputs" /> |
47 </when> | 51 </when> |
48 </conditional> | 52 </conditional> |
70 | 74 |
71 <token name="@pdb_source@"> | 75 <token name="@pdb_source@"> |
72 #if $pdb_source.pdb_source_selector == 'indexed': | 76 #if $pdb_source.pdb_source_selector == 'indexed': |
73 -d '${pdb_source.pdb.fields.path}.ffdata' | 77 -d '${pdb_source.pdb.fields.path}.ffdata' |
74 -i '${pdb_source.pdb.fields.path}.ffindex' | 78 -i '${pdb_source.pdb.fields.path}.ffindex' |
79 -z '$pdb_source.zipped' | |
75 #else | 80 #else |
76 -d '$pdb_source.ffdata' | 81 -d '$pdb_source.ffdata' |
77 -i '$pdb_source.ffindex' | 82 -i '$pdb_source.ffindex' |
78 #end if | 83 #end if |
79 </token> | 84 </token> |