Mercurial > repos > guerler > springsuite

comparison spring_map.xml @ 38:80a4b98121b6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit 22cd6b0fa88ce0ddc4052beab306f5ba10754f12"
author guerler
date Wed, 25 Nov 2020 17:38:24 +0000
parents 0be0af9e695d
children 172398348efd
comparison
equal deleted inserted replaced
37:0be0af9e695d 38:80a4b98121b6
5 </requirements> 5 </requirements>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 python3 '$__tool_directory__/spring_map.py' -l '$list' -i '$index' -d '$database' -c '$cross' -o '$output' -g '$log' -t temp 7 python3 '$__tool_directory__/spring_map.py' -l '$list' -i '$index' -d '$database' -c '$cross' -o '$output' -g '$log' -t temp
8 ]]></command> 8 ]]></command>
9 <inputs> 9 <inputs>
10 <param format="tabular" name="list" type="data" label="PDB Chain Identifiers" help="List of PDB chains [PDB_CHAIN]."/> 10 <param format="tabular" name="list" type="data" label="PDB Chain Identifiers" help="List of PDB chains `PDB_CHAIN`."/>
11 <param format="tabular" name="index" type="data" label="PDB Database Index" help="Database Index file (ffindex)."/> 11 <param format="ffindex" name="index" type="data" label="PDB Database Index" help="Database Index file."/>
12 <param format="data" name="database" type="data" label="PDB Database" help="Database Data file (ffdata)."/> 12 <param format="ffdata" name="database" type="data" label="PDB Database" help="Database Data file."/>
13 <param format="tabular" name="cross" type="data" label="Unmapped Cross Reference" help="SPRING PDB Cross Reference (unmapped)."/> 13 <param format="tabular" name="cross" type="data" label="Cross Reference (unmapped)" help="Unmapped SPRING PDB Cross Reference as produced by SPRING Cross tool."/>
14 </inputs> 14 </inputs>
15 <outputs> 15 <outputs>
16 <data format="tabular" name="output" label="SPRING Map Cross Reference"/> 16 <data format="tabular" name="output" label="SPRING Map Cross Reference"/>
17 <data format="txt" name="log" label="SPRING Map Log"/> 17 <data format="txt" name="log" label="SPRING Map Log"/>
18 </outputs> 18 </outputs>