Mercurial > repos > guerler > springsuite
view planemo/lib/python3.7/site-packages/rdflib/plugins/stores/auditable.py @ 1:56ad4e20f292 draft
"planemo upload commit 6eee67778febed82ddd413c3ca40b3183a3898f1"
author | guerler |
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date | Fri, 31 Jul 2020 00:32:28 -0400 |
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""" This wrapper intercepts calls through the store interface and implements thread-safe logging of destructive operations (adds / removes) in reverse. This is persisted on the store instance and the reverse operations are executed In order to return the store to the state it was when the transaction began Since the reverse operations are persisted on the store, the store itself acts as a transaction. Calls to commit or rollback, flush the list of reverse operations This provides thread-safe atomicity and isolation (assuming concurrent operations occur with different store instances), but no durability (transactions are persisted in memory and wont be available to reverse operations after the system fails): A and I out of ACID. """ from rdflib.store import Store from rdflib import Graph, ConjunctiveGraph import threading destructiveOpLocks = { 'add': None, 'remove': None, } class AuditableStore(Store): def __init__(self, store): self.store = store self.context_aware = store.context_aware # NOTE: this store can't be formula_aware as it doesn't have enough # info to reverse the removal of a quoted statement self.formula_aware = False # store.formula_aware self.transaction_aware = True # This is only half true self.reverseOps = [] self.rollbackLock = threading.RLock() def open(self, configuration, create=True): return self.store.open(configuration, create) def close(self, commit_pending_transaction=False): self.store.close() def destroy(self, configuration): self.store.destroy(configuration) def query(self, *args, **kw): return self.store.query(*args, **kw) def add(self, triple, context, quoted=False): (s, p, o) = triple lock = destructiveOpLocks['add'] lock = lock if lock else threading.RLock() with lock: context = context.__class__(self.store, context.identifier) if context is not None else None ctxId = context.identifier if context is not None else None if list(self.store.triples(triple, context)): return # triple already in store, do nothing self.reverseOps.append((s, p, o, ctxId, 'remove')) try: self.reverseOps.remove((s, p, o, ctxId, 'add')) except ValueError: pass self.store.add((s, p, o), context, quoted) def remove(self, xxx_todo_changeme, context=None): (subject, predicate, object_) = xxx_todo_changeme lock = destructiveOpLocks['remove'] lock = lock if lock else threading.RLock() with lock: # Need to determine which quads will be removed if any term is a # wildcard context = context.__class__(self.store, context.identifier) if context is not None else None ctxId = context.identifier if context is not None else None if None in [subject, predicate, object_, context]: if ctxId: for s, p, o in context.triples((subject, predicate, object_)): try: self.reverseOps.remove((s, p, o, ctxId, 'remove')) except ValueError: self.reverseOps.append((s, p, o, ctxId, 'add')) else: for s, p, o, ctx in ConjunctiveGraph(self.store).quads((subject, predicate, object_)): try: self.reverseOps.remove((s, p, o, ctx.identifier, 'remove')) except ValueError: self.reverseOps.append((s, p, o, ctx.identifier, 'add')) else: if not list(self.triples((subject, predicate, object_), context)): return # triple not present in store, do nothing try: self.reverseOps.remove((subject, predicate, object_, ctxId, 'remove')) except ValueError: self.reverseOps.append((subject, predicate, object_, ctxId, 'add')) self.store.remove((subject, predicate, object_), context) def triples(self, triple, context=None): (su, pr, ob) = triple context = context.__class__(self.store, context.identifier) if context is not None else None for (s, p, o), cg in self.store.triples((su, pr, ob), context): yield (s, p, o), cg def __len__(self, context=None): context = context.__class__(self.store, context.identifier) if context is not None else None return self.store.__len__(context) def contexts(self, triple=None): for ctx in self.store.contexts(triple): yield ctx def bind(self, prefix, namespace): self.store.bind(prefix, namespace) def prefix(self, namespace): return self.store.prefix(namespace) def namespace(self, prefix): return self.store.namespace(prefix) def namespaces(self): return self.store.namespaces() def commit(self): self.reverseOps = [] def rollback(self): # Aquire Rollback lock and apply reverse operations in the forward # order with self.rollbackLock: for subject, predicate, obj, context, op in self.reverseOps: if op == 'add': self.store.add( (subject, predicate, obj), Graph(self.store, context)) else: self.store.remove( (subject, predicate, obj), Graph(self.store, context)) self.reverseOps = []