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comparison mgescan.xml @ 8:106ee0841650 draft

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Uploaded
author hyungrolee
date Mon, 15 Feb 2016 03:38:32 -0500
parents 7658ef159fd8
children 89461b062f91
comparison
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7:b14f55bb20be 8:106ee0841650
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 2 <tool name="MGEScan" id="mgescan" version="3.0.0">
3 <tool name="MGEScan" id="mgescan" version="0.0.2">
4 <description> 3 <description>
5 MGEScan 4 MGEScan
6 </description> 5 </description>
7 <requirements> 6 <requirements>
8 <requirement type="package" version="3.0">mgescan</requirement> 7 <requirement type="package" version="3.0.0">mgescan</requirement>
8 <requirement type="package" version="4.0.0">tandem_repeats_finder</requirement>
9 </requirements> 9 </requirements>
10 <version_command>mgescan --version</version_command> 10 <version_command>mgescan --version</version_command>
11 <command interpreter="bash"> 11 <command interpreter="bash">
12 mgescan.sh $input '$input.name' 3 $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 $both_gff3 $mpi_yn.nmpi 12 mgescan.sh $input '$input.name' 3 $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 $both_gff3 $mpi_yn.nmpi
13 <!-- mgescan.sh $input $input.name $hmmver $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 --> 13 <!-- mgescan.sh $input $input.name $hmmver $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 -->