Mercurial > repos > hyungrolee > mgescan

comparison mgescan.xml @ 13:3d8b6dfd5743 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author hyungrolee
date Mon, 15 Feb 2016 04:22:02 -0500
parents 89461b062f91
children 1234e527defa
comparison
equal deleted inserted replaced
12:1a143426370c 13:3d8b6dfd5743
5 </description> 5 </description>
6 <requirements> 6 <requirements>
7 <requirement type="package" version="3.0.0">mgescan</requirement> 7 <requirement type="package" version="3.0.0">mgescan</requirement>
8 <requirement type="package" version="4.0.0">tandem_repeats_finder</requirement> 8 <requirement type="package" version="4.0.0">tandem_repeats_finder</requirement>
9 <requirement type="package" version="5.0.0">emboss</requirement> 9 <requirement type="package" version="5.0.0">emboss</requirement>
10 <requirement type="package" version="3.1b1">hmmer</requirement>
10 </requirements> 11 </requirements>
11 <version_command>mgescan --version</version_command> 12 <version_command>mgescan --version</version_command>
12 <command interpreter="bash"> 13 <command interpreter="bash">
13 mgescan.sh $input '$input.name' 3 $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 $both_gff3 $mpi_yn.nmpi 14 mgescan.sh $input '$input.name' 3 $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 $both_gff3 $mpi_yn.nmpi
14 <!-- mgescan.sh $input $input.name $hmmver $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 --> 15 <!-- mgescan.sh $input $input.name $hmmver $output $program $clade $qvalue_en $qvalue_rt $ltr_gff3 $nonltr_gff3 -->