Mercurial > repos > idot > coverage_correlation
annotate mkCorr.sh @ 1:f106b52086b0
Uploaded
| author | idot |
|---|---|
| date | Sun, 18 Aug 2013 09:42:36 -0400 |
| parents | |
| children | 7bdd29cdfed8 |
| rev | line source |
|---|---|
| 1 | 1 #!/bin/sh |
| 2 TOOLDIR="$( cd -P "$( dirname "${BASH_SOURCE[0]}" )" && pwd )" | |
| 3 | |
| 4 #echo "running corr" | |
| 5 #echo $PWD | |
| 6 | |
| 7 | |
| 8 | |
| 9 if [ -f /biosw/modules/init/modules-env.sh ]; then | |
| 10 module load R/3.0.0 | |
| 11 fi; | |
| 12 | |
| 13 cp $TOOLDIR/corr.R $PWD | |
| 14 | |
| 15 ./corr.R "$@" > err.log 2>&1 | |
| 16 | |
| 17 if [ $? -eq 0 ] | |
| 18 then | |
| 19 echo 'correlation result' | |
| 20 exit 0 | |
| 21 else | |
| 22 cat err.log >&2 | |
| 23 exit 1 | |
| 24 fi |