Mercurial > repos > ieguinoa > data_manager_salmon_index_builder

comparison data_manager_conf.xml @ 0:6cd60ba8a842 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author ieguinoa
date Tue, 14 Aug 2018 11:14:52 -0400
parents
children c5dea2080109
comparison
equal deleted inserted replaced
-1:000000000000 0:6cd60ba8a842
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_fetch_gff.xml" id="data_manager_fetch_gff">
4 <data_table name="all_gff">
5 <output>
6 <column name="value" />
7 <column name="dbkey" />
8 <column name="name" />
9 <column name="path" output_ref="out_file">
10 <move type="file">
11 <source>${path}</source>
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/gff/${path}</target>
13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/gff/${path}</value_translation>
15 <value_translation type="function">abspath</value_translation>
16 </column>
17 </output>
18 </data_table>
19 <data_table name="representative_gff">
20 <output>
21 <column name="value" />
22 <column name="dbkey" />
23 <column name="name" />
24 <column name="path" output_ref="out_file">
25 <move type="file">
26 <source>${path}</source>
27 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/representative_gff/${path}</target>
28 </move>
29 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/representative_gff/${path}</value_translation>
30 <value_translation type="function">abspath</value_translation>
31 </column>
32 </output>
33 </data_table>
34 </data_manager>
35 </data_managers>