Mercurial > repos > ieguinoa > data_manager_salmon_index_builder

comparison tool_data_table_conf.xml.sample @ 1:c5dea2080109 draft

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author ieguinoa
date Tue, 14 Aug 2018 11:19:49 -0400
parents 6cd60ba8a842
children 3d12fd3b7cae
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0:6cd60ba8a842 1:c5dea2080109
1 <?xml version="1.0"?>
2 <tables> 1 <tables>
3 <table name="all_gff" comment_char="#"> <columns>value, dbkey, name, path</columns> <file path="tool-data/all_gff.loc" /> </table> 2 <!-- Locations of all fasta files under genome directory -->
4 <table name="representative_gff" comment_char="#"> <columns>value, dbkey, name, path</columns> <file path="tool-data/representative_gff.loc" /> </table> 3 <table name="all_fasta" comment_char="#" allow_duplicate_entries="False">
4 <columns>value, dbkey, name, path</columns>
5 <file path="tool-data/all_fasta.loc" />
6 </table>
7 <!-- Locations of indexes in the kallisto mapper format -->
8 <table name="salmon_indexes" comment_char="#" allow_duplicate_entries="False">
9 <columns>value, dbkey, name, path</columns>
10 <file path="tool-data/salmon_indexes.loc" />
11 </table>
5 </tables> 12 </tables>