Mercurial > repos > imgteam > 2d_feature_extraction

diff test-data/input/README.md @ 8:0b5ddf7b2924 draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/2d_feature_extraction/ commit bb2d58ed37d8eb09583b86e3cdd9f5d1b56c42a0
author imgteam
date Sun, 04 Jan 2026 20:56:49 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/input/README.md	Sun Jan 04 20:56:49 2026 +0000
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+# Overview of the test images
+
+## Label maps
+
+### `input9.zarr`:
+
+- axes: `ZYX`
+- resolution: `(2, 100, 100)`
+- dtype: `bool`
+- binary image
+- metadata:
+  - resolution: `(1.0, 1.0)`
+  - z-spacing: `1.0`
+  - unit: `um`
+
+### `input11.tiff`
+
+- axes: `YX`
+- resolution: `(265, 329)`
+- dtype: `uint16`
+- binary image
+
+### `input12.png`
+
+- axes: `YX`
+- resolution: `(58, 64)`
+- dtype: `uint8`
+- labels: `0...24`
+
+### `input13.zarr`
+
+- axes: `YX`
+- resolution: `(265, 329)`
+- dtype: `uint8`
+- labels: `0...2`
+
+## Intensity images
+
+### `input1_uint8.tiff`:
+
+- axes: `YX`
+- resolution: `(265, 329)`
+- dtype: `uint8`
+- metadata: none
+
+### `input3_uint16.tiff`:
+
+- axes: `YXC`
+- resolution: `(58, 64, 3)`
+- dtype: `uint16`
+- metadata:
+  - resolution: `(2.0, 1.0)`
+  - unit: `mm`
+
+### `input8_zyx.zarr`:
+
+- axes: `ZYX`
+- resolution: `(2, 100, 100)`
+- dtype: `float64`
+- metadata:
+  - resolution: `(1.0, 1.0)`
+  - z-spacing: `1.0`
+  - unit: `um`
+
+### `input10.zarr`:
+
+- axes: `CYX`
+- resolution: `(2, 64, 64)`
+- dtype: `uint8`
+- metadata:
+  - resolution: `(1.0, 1.0)`
+  - z-spacing: `1.0`
+  - unit: `um`