Mercurial > repos > imgteam > 2d_histogram_equalization

comparison histogram_equalization.xml @ 1:77f7159d775a draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/2d_histogram_equalization/ commit 2286a6c9da88596349ed9d967c51541409c0a7bf
author imgteam
date Mon, 13 Nov 2023 22:10:25 +0000
parents 70316d792fc9
children 3f3783846dc0
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0:70316d792fc9 1:77f7159d775a
1 <tool id="ip_histogram_equalization" name="Histogram equalization" version="0.0.1"> 1 <tool id="ip_histogram_equalization" name="Perform histogram equalization" version="0.0.1-2">
2 <description>automatic histogram equalization</description> 2 <description>with scikit-image</description>
3 <requirements> 3 <edam_operations>
4 <edam_operation>operation_3443</edam_operation>
5 </edam_operations>
6 <xrefs>
7 <xref type="bio.tools">galaxy_image_analysis</xref>
8 </xrefs>
9 <requirements>
4 <requirement type="package" version="0.14.2">scikit-image</requirement> 10 <requirement type="package" version="0.14.2">scikit-image</requirement>
5 <requirement type="package" version="1.15.4">numpy</requirement> 11 <requirement type="package" version="1.15.4">numpy</requirement>
6 <requirement type="package" version="5.3.0">pillow</requirement> 12 <requirement type="package" version="5.3.0">pillow</requirement>
7 <requirement type="package" version="0.15.1">tifffile</requirement> 13 <requirement type="package" version="0.15.1">tifffile</requirement>
8 </requirements> 14 </requirements>
9 <command detect_errors="aggressive"> 15 <command detect_errors="aggressive">
10 <![CDATA[ 16 <![CDATA[
11 python '$__tool_directory__/histogram_equalization.py' '$input' '$output' $h_type 17 python '$__tool_directory__/histogram_equalization.py' '$input' '$output' $h_type
12 ]]> 18 ]]>
13 </command> 19 </command>
14 <inputs> 20 <inputs>
15 <param name="input" type="data" format="tiff" label="Source file" /> 21 <param name="input" type="data" format="tiff" label="Source file" />
16 <param name="h_type" type="select" label="Histogram Equalization Algorithm"> 22 <param name="h_type" type="select" label="Histogram Equalization Algorithm">
17 <option value="default">Stretching</option> 23 <option value="default">Stretching</option>
18 <option value="clahe" selected="True">CLAHE</option> 24 <option value="clahe" selected="True">CLAHE</option>
19 </param> 25 </param>