# HG changeset patch # User imgteam # Date 1713946314 0 # Node ID b1c2c210813cc218d435482c91e13cb5c9c929b4 # Parent 3f3783846dc0906e6dce7d861eaaa25fc8416bac planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/2d_histogram_equalization/ commit c86a1b93cb7732f7331a981d13465653cc1a2790 diff -r 3f3783846dc0 -r b1c2c210813c histogram_equalization.py --- a/histogram_equalization.py Thu Apr 04 15:23:34 2024 +0000 +++ b/histogram_equalization.py Wed Apr 24 08:11:54 2024 +0000 @@ -1,6 +1,7 @@ import argparse import sys +import giatools.io import skimage.exposure import skimage.io import skimage.util @@ -17,7 +18,7 @@ parser.add_argument('h_type', choices=hOptions.keys(), help='histogram equalization method') args = parser.parse_args() - img_in = skimage.io.imread(args.input_file.name) + img_in = giatools.io.imread(args.input_file.name) res = hOptions[args.h_type](img_in) res = skimage.util.img_as_uint(res) skimage.io.imsave(args.out_file.name, res, plugin="tifffile") diff -r 3f3783846dc0 -r b1c2c210813c histogram_equalization.xml --- a/histogram_equalization.xml Thu Apr 04 15:23:34 2024 +0000 +++ b/histogram_equalization.xml Wed Apr 24 08:11:54 2024 +0000 @@ -3,7 +3,7 @@ creators.xml tests.xml - 0.14.2 + 0.18.1 0 @@ -18,9 +18,9 @@ scikit-image - numpy - pillow - tifffile + numpy + tifffile + giatools