Mercurial > repos > imgteam > binary2labelimage
view binary2label.xml @ 2:6e65fd971e13 draft
"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/binary2labelimage/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
author | imgteam |
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date | Wed, 18 Dec 2019 05:01:27 -0500 |
parents | 6c92ac9ce868 |
children | 9bb446db4a1e |
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<tool id="ip_binary_to_labelimage" name="Binary 2 Label" version="0.4"> <description>Converts Binary to Label Image</description> <requirements> <requirement type="package" version="0.12.3">scikit-image</requirement> <requirement type="package" version="0.15.1">tifffile</requirement> </requirements> <command detect_errors="aggressive"> <![CDATA[ python '$__tool_directory__/binary2label.py' '$input' '$output' ]]> </command> <inputs> <param name="input" type="data" format="tiff,png,jpg,bmp" label="Binary Image File"/> </inputs> <outputs> <data format="tiff" name="output"/> </outputs> <tests> <test> <param name="input" value="galaxyIcon_noText.tif" /> <output name="output" value="label.tif" ftype="tiff" compare="sim_size"/> </test> </tests> <help> **What it does** This tool assigns every object an own grey value. </help> <citations> <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> </citations> </tool>