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comparison binaryimage2points.xml @ 0:cb1eaebdb4c4 draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/binaryimage2points/ commit c3f4b766f03770f094fda6bda0a5882c0ebd4581
author imgteam
date Sat, 09 Feb 2019 14:31:13 -0500
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1 <tool id="ip_binaryimage_to_points" name="Binary To Points" version="0.1">
2 <description>Converts Binary Image to Points</description>
3 <requirements>
4 <requirement type="package" version="1.15.4">numpy</requirement><!--https://github.com/numpy/numpy/pull/432 -->
5 <requirement type="package" version="0.14.2">scikit-image</requirement>
6 <requirement type="package" version="0.23.4">pandas</requirement>
7 </requirements>
8 <command>
9 <![CDATA[
10 python '$__tool_directory__/binaryimage2points.py' '$input' '$output'
11 ]]>
12 </command>
13 <inputs>
14 <param name="input" type="data" format="tiff" label="Binary Image File"/>
15 </inputs>
16 <outputs>
17 <data format="tabular" name="output"/>
18 </outputs>
19 <tests>
20 <test>
21 <param name="input" value="galaxyIcon_noText.tif" />
22 <output name="output" value="points.tsv" ftype="tabular" />
23 </test>
24 </tests>
25 <help>
26 **What it does**
27
28 This tool converts an image to points.</help>
29 <citations>
30 <citation type="doi">10.7717/peerj.453</citation>
31 </citations>
32 </tool>