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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit c045f067a57e8308308cf6329060c7ccd3fc372f
author imgteam
date Thu, 04 Apr 2024 15:25:16 +0000
parents b32f5368e279
children
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b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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1 {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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2 "multiscales" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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3 "metadata" : {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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4 "method" : "loci.common.image.SimpleImageScaler",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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5 "version" : "Bio-Formats 6.13.0"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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6 },
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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7 "axes" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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8 "name" : "t",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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9 "type" : "time"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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10 }, {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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11 "name" : "c",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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12 "type" : "channel"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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13 }, {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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14 "name" : "z",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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15 "type" : "space"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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16 }, {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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17 "name" : "y",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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18 "type" : "space"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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19 }, {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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20 "name" : "x",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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21 "type" : "space"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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22 } ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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23 "name" : "camera.jpg",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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24 "datasets" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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25 "path" : "0",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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26 "coordinateTransformations" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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27 "scale" : [ 1.0, 1.0, 1.0, 1.0, 1.0 ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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28 "type" : "scale"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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29 } ]
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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30 }, {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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31 "path" : "1",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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32 "coordinateTransformations" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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33 "scale" : [ 1.0, 1.0, 1.0, 2.0, 2.0 ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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34 "type" : "scale"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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35 } ]
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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36 }, {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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37 "path" : "2",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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38 "coordinateTransformations" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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39 "scale" : [ 1.0, 1.0, 1.0, 4.0, 4.0 ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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40 "type" : "scale"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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41 } ]
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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42 } ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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43 "version" : "0.4"
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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44 } ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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45 "omero" : {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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46 "channels" : [ {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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47 "color" : "808080",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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48 "coefficient" : 1,
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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49 "active" : true,
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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50 "label" : "Channel 0",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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51 "window" : {
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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52 "min" : 0.0,
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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53 "max" : 255.0,
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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54 "start" : 0.0,
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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55 "end" : 255.0
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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56 },
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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57 "family" : "linear",
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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58 "inverted" : false
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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59 } ],
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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60 "rdefs" : {
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61 "defaultT" : 0,
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62 "model" : "greyscale",
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63 "defaultZ" : 0
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64 }
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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65 }
b32f5368e279 planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/bioformats2raw commit 98bcca8b963b30cf12dd7f659a4a52764c33e7cc
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66 }