Mercurial > repos > imgteam > coordinates_of_roi
diff coordinates_of_roi.xml @ 3:02a686fc1654 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/coordinates_of_roi/ commit da043bdec956714abb0fa82f278931bbe1a6d41d
author | imgteam |
---|---|
date | Mon, 25 Mar 2019 11:15:39 -0400 |
parents | 24d9bd16c953 |
children | 00175f4a2bbb |
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--- a/coordinates_of_roi.xml Wed Mar 20 09:18:06 2019 -0400 +++ b/coordinates_of_roi.xml Mon Mar 25 11:15:39 2019 -0400 @@ -9,7 +9,6 @@ python '$__tool_directory__/coordinates_of_roi.py' '$im' '$pixel_table' - $offset_x $offset_y $white_obj --threshold $threshold ]]> @@ -19,8 +18,6 @@ <param name="white_obj" type="boolean" truevalue="--white_obj" falsevalue="" checked="false" label="Set to Yes if object is white and background black, otherwise set to No" /> <param name="threshold" type="float" value="0.5" label="Threshold value" /> - <param name="offset_x" type="integer" value="0" label="Added offset in x direction (=width direction)" /> - <param name="offset_y" type="integer" value="0" label="Added offset in y direction (=height direction)" /> </inputs> <outputs> <data format="tabular" name="pixel_table" /> @@ -31,13 +28,6 @@ <param name="white_obj" value="true"/> <output name="pixel_table" value="newtable.tsv" ftype="tabular"/> </test> - <test> - <param name="im" value="test.png"/> - <param name="white_obj" value="true"/> - <param name="offset_x" value="1"/> - <param name="offset_y" value="2"/> - <output name="pixel_table" value="newtable2.tsv" ftype="tabular"/> - </test> </tests> <help> **What it does**