Mercurial > repos > imgteam > image_math

diff image_math.py @ 2:48fa3ac55df2 draft default tip

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/image_math commit c86a1b93cb7732f7331a981d13465653cc1a2790
author imgteam
date Wed, 24 Apr 2024 08:12:29 +0000
parents 33b2ca53a566
children
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line diff
--- a/image_math.py	Thu Apr 04 15:25:35 2024 +0000
+++ b/image_math.py	Wed Apr 24 08:12:29 2024 +0000
@@ -2,6 +2,7 @@
 import ast
 import operator
 
+import giatools.io
 import numpy as np
 import skimage.io
 
@@ -77,7 +78,7 @@
     im_shape = None
     for input in args.input:
         name, filepath = input.split(':')
-        im = skimage.io.imread(filepath)
+        im = giatools.io.imread(filepath)
         assert name not in inputs, 'Input name "{name}" is ambiguous.'
         inputs[name] = im
         if im_shape is None: