Mercurial > repos > imgteam > imagej2_create_image

diff imagej2_adjust_threshold_binary_jython_script.py @ 2:666af1279007 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit 57a0433defa3cbc37ab34fbb0ebcfaeb680db8d5
author imgteam
date Sun, 05 Nov 2023 10:54:34 +0000
parents 1a7c29d5fc11
children 69e28b06e027
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line diff
--- a/imagej2_adjust_threshold_binary_jython_script.py	Mon Sep 28 16:43:06 2020 +0000
+++ b/imagej2_adjust_threshold_binary_jython_script.py	Sun Nov 05 10:54:34 2023 +0000
@@ -26,7 +26,11 @@
 # Convert image to binary if necessary.
 if not image_processor_copy.isBinary():
     # Convert the image to binary grayscale.
-    IJ.run(input_image_plus_copy, "Make Binary", "iterations=1 count=1 edm=Overwrite do=Nothing")
+    IJ.run(
+        input_image_plus_copy,
+        "Make Binary",
+        "iterations=1 count=1 edm=Overwrite do=Nothing",
+    )
 # Set the options.
 if black_background:
     method_str = "%s dark" % method