comparison imagej2_shadows.xml @ 0:7baf811ed973 draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit b08f0e6d1546caaf627b21f8c94044285d5d5b9c-dirty"
author imgteam
date Tue, 17 Sep 2019 16:59:39 -0400
parents
children c8bb47840c8d
comparison
equal deleted inserted replaced
-1:000000000000 0:7baf811ed973
1 <?xml version='1.0' encoding='UTF-8'?>
2 <tool id="imagej2_shadows" name="Add shadow effect" version="@WRAPPER_VERSION@.0">
3 <description></description>
4 <macros>
5 <import>imagej2_macros.xml</import>
6 </macros>
7 <expand macro="fiji_requirements" />
8 <command>
9 <![CDATA[
10 python $__tool_directory__/imagej2_shadows.py
11 --input "$input"
12 --input_datatype $input.ext
13 --direction $direction
14 --jython_script $__tool_directory__/imagej2_shadows_jython_script.py
15 --output_datatype $output.ext
16 --output "$output"
17 ]]>
18 </command>
19 <inputs>
20 <param format="bmp,eps,gif,jpg,pcx,pgm,png,psd,tiff" name="input" type="data" label="Select image"/>
21 <param name="direction" type="select" label="Direction" help="Light will appear to come from the selected direction">
22 <option value="East" selected="True">East</option>
23 <option value="North">North</option>
24 <option value="Northeast">Northeast</option>
25 <option value="Northwest">Northwest</option>
26 <option value="South">South</option>
27 <option value="Southeast">Southeast</option>
28 <option value="Southwest">Southwest</option>
29 <option value="West">West</option>
30 </param>
31 </inputs>
32 <outputs>
33 <data name="output" format_source="input" label="${tool.name} on ${on_string}: Light from ${direction}"/>
34 </outputs>
35 <tests>
36 <test>
37 <param name="input" value="blobs.gif" />
38 <param name="direction" value="Northwest" />
39 <output name="output" file="blobs_northwest.gif" compare="sim_size" />
40 </test>
41 </tests>
42 <help>
43
44 **What it does**
45
46 <![CDATA[
47
48 Produces a shadow effect, with light appearing to come from the selected direction (East, North, Northeast,
49 Northwest, South, Southeast, Southwest and West). The underlying commands use Convolve 3 × 3, ImageJ’s 3 × 3
50 convolution function.
51
52 ]]>
53
54 </help>
55 <expand macro="fiji_headless_citations" />
56 </tool>