Mercurial > repos > imgteam > imagej2_sharpen
diff imagej2_sharpen.xml @ 0:a84f2cbf091b draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit b08f0e6d1546caaf627b21f8c94044285d5d5b9c-dirty"
author | imgteam |
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date | Tue, 17 Sep 2019 17:08:08 -0400 |
parents | |
children | 4c43ba752312 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/imagej2_sharpen.xml Tue Sep 17 17:08:08 2019 -0400 @@ -0,0 +1,49 @@ +<?xml version='1.0' encoding='UTF-8'?> +<tool id="imagej2_sharpen" name="Sharpen" version="@WRAPPER_VERSION@.0"> + <description></description> + <macros> + <import>imagej2_macros.xml</import> + </macros> + <expand macro="fiji_requirements" /> + <command> +<![CDATA[ + python $__tool_directory__/imagej2_sharpen.py + --input "$input" + --input_datatype $input.ext + --jython_script $__tool_directory__/imagej2_sharpen_jython_script.py + --output_datatype $output.ext + --output "$output" +]]> + </command> + <inputs> + <param format="bmp,eps,gif,jpg,pcx,pgm,png,psd,tiff" name="input" type="data" label="Select image"/> + </inputs> + <outputs> + <data name="output" format_source="input" label="${tool.name} on ${on_string}"/> + </outputs> + <tests> + <test> + <param name="input" value="blobs.gif" /> + <output name="output" file="blobs_sharpen.gif" compare="sim_size" /> + </test> + </tests> + <help> + +**What it does** + +<![CDATA[ + +Increases contrast and accentuates detail in the image, but may also accentuate noise. This filter +uses the following weighting factors to replace each pixel with a weighted average of the 3x3 neighborhood. + +``-1 -1 -1`` + +``-1 12 -1`` + +``-1 -1 -1`` + +]]> + + </help> + <expand macro="fiji_headless_citations" /> +</tool>