Mercurial > repos > imgteam > landmark_registration

comparison landmark_registration.xml @ 5:12997d4c5b00 draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/landmark_registration/ commit 6d6a6fd04fa1d1f9a5bf1aff451e43be072c0293
author imgteam
date Wed, 03 Aug 2022 16:50:52 +0000
parents aee73493bf53
children 02aa2873e67d
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4:aee73493bf53 5:12997d4c5b00
1 <tool id="ip_landmark_registration" name="Landmark Registration" version="0.0.5" profile="20.05"> 1 <tool id="ip_landmark_registration" name="Landmark Registration" version="0.1.0" profile="20.05">
2 <description>estimates the affine transformation matrix or performs piecewise affine transformation</description> 2 <description>estimates the affine transformation matrix or performs piecewise affine transformation</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.18.1">scikit-image</requirement> 4 <requirement type="package" version="0.18.1">scikit-image</requirement>
5 <requirement type="package" version="1.6.2">scipy</requirement> 5 <requirement type="package" version="1.6.2">scipy</requirement>
6 <requirement type="package" version="1.2.4">pandas</requirement> 6 <requirement type="package" version="1.2.4">pandas</requirement>
72 2) Piecewise affine transformation of points based on landmark pairs. 72 2) Piecewise affine transformation of points based on landmark pairs.
73 73
74 About the format of landmark/point coordinates in the input TSV table: Columns with header "x" and "y" are for x- and y-coordinate, respectively. 74 About the format of landmark/point coordinates in the input TSV table: Columns with header "x" and "y" are for x- and y-coordinate, respectively.
75 </help> 75 </help>
76 <citations> 76 <citations>
77 <citation type="doi">10.3390/cells11152390</citation>
77 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> 78 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
78 </citations> 79 </citations>
79 </tool> 80 </tool>