Mercurial > repos > imgteam > landmark_registration_ls

comparison landmark_registration_ls.xml @ 1:69db8c7d4244 draft default tip

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"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/landmark_registration_ls/ commit 927b78d47c31714776ccdf3d16f26c3779298abb"
author imgteam
date Sun, 20 Feb 2022 15:47:16 +0000
parents 2f36165c49fb
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0:2f36165c49fb 1:69db8c7d4244
1 <tool id="ip_landmark_registration_ls" name="Landmark Registration" version="0.0.1"> 1 <tool id="ip_landmark_registration_ls" name="Landmark Registration" version="0.0.2" profile="20.05">
2 <description>using least squares</description> 2 <description>using least squares</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.2.1">scipy</requirement> 4 <requirement type="package" version="1.2.1">scipy</requirement>
5 <requirement type="package" version="0.23.4">pandas</requirement> 5 <requirement type="package" version="0.23.4">pandas</requirement>
6 <requirement type="package" version="1.15.2">numpy</requirement> 6 <requirement type="package" version="1.15.2">numpy</requirement>
7 </requirements> 7 </requirements>
8 <command><![CDATA[ 8 <command detect_errors="aggressive">
9 <![CDATA[
9 python '$__tool_directory__/landmark_registration_ls.py' 10 python '$__tool_directory__/landmark_registration_ls.py'
10 '$fn_pts1' 11 '$fn_pts1'
11 '$fn_pts2' 12 '$fn_pts2'
12 '$fn_tmat' 13 '$fn_tmat'
13 ]]></command> 14 ]]></command>
27 </tests> 28 </tests>
28 <help> 29 <help>
29 **What it does** 30 **What it does**
30 31
31 This tool estimates the (affine) transformation matrix using least squares given two sets of 2d coordinates of landmarks. 32 This tool estimates the (affine) transformation matrix using least squares given two sets of 2d coordinates of landmarks.
33
34 Note: This tool is deprecated and may not be supported in future. Please use the tool "Landmark Registration" instead.
32 </help> 35 </help>
36 <citations>
37 </citations>
33 </tool> 38 </tool>