# HG changeset patch
# User imgteam
# Date 1563786231 14400
# Node ID 8ad39f4935871dc5e32174e24deba6eab1e89fc7
# Parent  63b2a10b10019dc1506fe4c2518fa0b1e0ee1a20
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/overlay_segmentation_mask/ commit b2acc1845a25828181597fe5b6982fe116a7796d

diff -r 63b2a10b1001 -r 8ad39f493587 overlay_segmentation_mask.py
--- a/overlay_segmentation_mask.py	Sat Feb 09 14:41:11 2019 -0500
+++ b/overlay_segmentation_mask.py	Mon Jul 22 05:03:51 2019 -0400
@@ -9,7 +9,7 @@
 #TODO make importable by python script
 
 import skimage.io
-import skimage.measure
+import skimage.measure 
 
 parser = argparse.ArgumentParser()
 parser.add_argument('input_file', type=argparse.FileType('r'), help='input file')
@@ -38,4 +38,4 @@
     plt.imshow(img)
 plt.contour(label, linewidths=args.thickness, colors=args.stroke_color)
 
-fig.canvas.print_png(args.out_file)
\ No newline at end of file
+fig.canvas.print_png(args.out_file)
diff -r 63b2a10b1001 -r 8ad39f493587 overlay_segmentation_mask.xml
--- a/overlay_segmentation_mask.xml	Sat Feb 09 14:41:11 2019 -0500
+++ b/overlay_segmentation_mask.xml	Mon Jul 22 05:03:51 2019 -0400
@@ -1,10 +1,11 @@
-<tool id="ip_overlay_segmentation" name="Overlay Segmentation Mask" version="0.0.6">
+<tool id="ip_overlay_segmentation" name="Overlay Segmentation Mask" version="0.0.6"> 
     <description>Overlay Segmentation Mask</description>
     <requirements>
-        <requirement type="package" version="0.14.2">scikit-image</requirement>
+        <requirement type="package" version="0.14.2">scikit-image</requirement> 
         <requirement type="package" version="3.0.2">matplotlib</requirement>
         <requirement type="package" version="5.3.0">pillow</requirement>
-        <requirement type="package" version="0.10.0">tifffile</requirement>
+        <requirement type="package" version="0.15.1">tifffile</requirement>
+        <requirement type="package" version="1.16.0">numpy</requirement>
     </requirements>
     <command detect_errors="aggressive"><![CDATA[
         python '$__tool_directory__/overlay_segmentation_mask.py'