Mercurial > repos > imgteam > projective_transformation
comparison projective_transformation.xml @ 0:17f5d0c3f8a3 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/projective_transformation/ commit c3f4b766f03770f094fda6bda0a5882c0ebd4581
| author | imgteam |
|---|---|
| date | Sat, 09 Feb 2019 14:44:40 -0500 |
| parents | |
| children | 974cf4357707 |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:17f5d0c3f8a3 |
|---|---|
| 1 <tool id="ip_projective_transformation" name="Projective Transformation" version="0.0.4"> | |
| 2 <description>Projective Transformation</description> | |
| 3 <requirements> | |
| 4 <requirement type="package" version="0.14.2">scikit-image</requirement> | |
| 5 <requirement type="package" version="0.23.4">pandas</requirement> | |
| 6 <requirement type="package" version="1.15.4">numpy</requirement> | |
| 7 <!--<requirement type="package" version="1.1.0">scipy</requirement>--> | |
| 8 </requirements> | |
| 9 <command> | |
| 10 <![CDATA[ | |
| 11 python '$__tool_directory__/projective_transformation.py' | |
| 12 '$fixed_image' | |
| 13 '$moving_image' | |
| 14 '$warp_matrix' | |
| 15 ./out.png | |
| 16 ]]> | |
| 17 </command> | |
| 18 <inputs> | |
| 19 <param name="moving_image" type="data" format="png" label="Moving Image" /> | |
| 20 <param name="fixed_image" type="data" format="png" label="Fixed Image" /> | |
| 21 <param name="warp_matrix" type= "data" format="tabular" label="Warp Matrix" /> | |
| 22 </inputs> | |
| 23 <outputs> | |
| 24 <data format="png" name="out" from_work_dir="out.png" /> | |
| 25 </outputs> | |
| 26 <tests> | |
| 27 <test> | |
| 28 <param name="fixed_image" value="sample1.png"/> | |
| 29 <param name="moving_image" value="sample2.png"/> | |
| 30 <param name="warp_matrix" value="warp_matrix.tsv"/> | |
| 31 <output name="out" value="yam.png" ftype="png" compare="sim_size"/> | |
| 32 </test> | |
| 33 </tests> | |
| 34 <help> | |
| 35 **What it does** | |
| 36 | |
| 37 This tool performs a projective transformation of the input (moving) image so that it fits the fixed image. | |
| 38 </help> | |
| 39 <citations> | |
| 40 <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> | |
| 41 </citations> | |
| 42 </tool> |