comparison repeat_channels.py @ 0:7cdb50fee601 draft default tip

planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/repeat_channels/ commit 60cf803236ef94f414056823688e6fd008b7a1b6
author imgteam
date Thu, 25 Apr 2024 10:57:53 +0000
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-1:000000000000 0:7cdb50fee601
1 import argparse
2
3 import giatools.io
4 import numpy as np
5 import skimage.io
6
7
8 if __name__ == '__main__':
9
10 parser = argparse.ArgumentParser()
11 parser.add_argument('input', type=str)
12 parser.add_argument('count', type=int)
13 parser.add_argument('output', type=str)
14 args = parser.parse_args()
15
16 im = giatools.io.imread(args.input)
17 im = np.squeeze(im)
18 im = np.dstack([im] * args.count)
19 skimage.io.imsave(args.output, im)