Mercurial > repos > imgteam > slice_image

diff slice_image.py @ 1:8856a7c85e4c draft

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"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/slice_image/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
author imgteam
date Wed, 18 Dec 2019 05:03:25 -0500
parents aacfbd7c4af6
children f312d414f234
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line diff
--- a/slice_image.py	Sat Feb 09 14:46:50 2019 -0500
+++ b/slice_image.py	Wed Dec 18 05:03:25 2019 -0500
@@ -8,10 +8,10 @@
 import skimage.util
 import skimage.feature
 from scipy.stats import entropy as scipy_entropy
-
+ 
 def slice_image(input_file, out_folder, label=None, label_out_folder=None, window_size=64, 
                 stride=1, bg_thresh=1, limit_slices=False, n_thresh=5000, seed=None):
-    #TODO NOT Implemented:process labels
+    #TODO NOT Implemented:process labels 
     # --> label and label_out_folder useless so far
 
     # primarily for testing purposes: