Mercurial > repos > imgteam > superdsm
view test-data/cfg-full.tsv @ 4:dc5f72f6b1e9 draft
planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/superdsm/ commit b0b09d6788778541d1c0b89ca96101fc57d60e22
author | imgteam |
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date | Mon, 12 Feb 2024 14:58:45 +0000 |
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Hyperparameter Value AF_scale c2f-region-analysis/AF_min_atom_radius 0.33 c2f-region-analysis/enabled True c2f-region-analysis/max_atom_norm_energy 0.05 c2f-region-analysis/max_cluster_marker_irregularity 0.2 c2f-region-analysis/min_atom_radius 30 c2f-region-analysis/min_norm_energy_improvement 0.1 c2f-region-analysis/seed_connectivity 8 dsm/AF_alpha 0.0005 dsm/AF_background_margin 0.4 dsm/AF_smooth_amount 0.2 dsm/AF_smooth_subsample 0.4 dsm/alpha 2.116 dsm/background_margin 26 dsm/cachesize 1 dsm/cachetest dsm/cp_timeout 300 dsm/enabled True dsm/epsilon 1.0 dsm/gaussian_shape_multiplier 2 dsm/init elliptical dsm/scale 1000 dsm/smooth_amount 13 dsm/smooth_mat_dtype float32 dsm/smooth_mat_max_allocations inf dsm/smooth_subsample 26 dsm/sparsity_tol 0 global-energy-minimization/AF_beta 0.66 global-energy-minimization/AF_max_seed_distance inf global-energy-minimization/beta 2793.1200000000003 global-energy-minimization/enabled True global-energy-minimization/gamma 0.8 global-energy-minimization/max_iter 5 global-energy-minimization/max_seed_distance inf global-energy-minimization/max_work_amount 1000000 global-energy-minimization/pruning exact histological False postprocess/AF_max_object_radius inf postprocess/AF_min_glare_radius inf postprocess/AF_min_object_radius 0.0 postprocess/contrast_epsilon 0.0001 postprocess/discard_image_boundary False postprocess/enabled True postprocess/exterior_offset 5 postprocess/exterior_scale 5 postprocess/fill_holes True postprocess/glare_detection_min_layer 0.5 postprocess/glare_detection_num_layers 5 postprocess/glare_detection_smoothness 3 postprocess/mask_max_distance 1 postprocess/mask_smoothness 3 postprocess/mask_stdamp 2.0 postprocess/max_boundary_eccentricity inf postprocess/max_eccentricity 0.99 postprocess/max_norm_energy 0.2 postprocess/max_object_radius inf postprocess/min_boundary_glare_radius inf postprocess/min_boundary_obj_radius 0 postprocess/min_contrast 1.35 postprocess/min_glare_radius inf postprocess/min_object_radius 0.0 preprocess/AF_sigma2 1.0 preprocess/enabled True preprocess/lower_clip_mean False preprocess/offset_clip 3 preprocess/sigma1 1.4142135623730951 preprocess/sigma2 65.05382386916237