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annotate test-data/flowcl_pop01.txt @ 1:62d8985a41e2 draft default tip

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"planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
author azomics
date Thu, 23 Jul 2020 08:58:29 -0400
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62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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1 [,1]
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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2 Short marker names "CD4+CCR3-CD8-CCR7-"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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3 Ontology marker names "CD4 molecule, C-C chemokine receptor type 3, T cell receptor"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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4 "co-receptor CD8, C-C chemokine receptor type 7"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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5 Experiment markers "CD4,CCR3,CD8,CCR7"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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6 Ontology exper. names "CD4 molecule, C-C chemokine receptor type 3, T cell receptor"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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7 "co-receptor CD8, C-C chemokine receptor type 7"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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8 Successful Match? "No"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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9 Marker ID "1) PR_000001004, PR_000025402, PR_000001203 2) PR_000001004,"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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10 "PR_000025402, PR_000001203 3) PR_000001004, PR_000025402,"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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11 "PR_000001203 4) PR_000001004, PR_000025402 5) PR_000001004,"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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12 "PR_000025402 + more"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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13 Marker Label "1) CD4 molecule, T cell receptor co-receptor CD8, C-C chemokine"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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14 "receptor type 7 2) CD4 molecule, T cell receptor co-receptor CD8, C-C"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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15 "chemokine receptor type 7 3) CD4 molecule, T cell receptor"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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16 "co-receptor CD8, C-C chemokine receptor type 7 4) CD4 molecule, T"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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17 "cell receptor co-receptor CD8 5) CD4 molecule, T cell receptor"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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18 "co-receptor CD8 + more"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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19 Marker Key "1) { CCR3- } CD8-, CCR7-, CD4+ ( ) [ alpha-beta T cell receptor"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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20 "complex+, receptor-type tyrosine-protein phosphatase C isoform"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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21 "CD45RA+, CD3+ ] 2) { CCR3- } CD8-, CCR7-, CD4+ ( ) [ alpha-beta T"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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22 "cell receptor complex+, C-X-C chemokine receptor type 5+, inducible"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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23 "T-cell costimulator+, programmed cell death protein 1+, CD3+ ] 3) {"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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24 "CCR3- } CD8-, CCR7-, CD4+ ( ) [ interleukin-2 receptor subunit"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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25 "alpha-, receptor-type tyrosine-protein phosphatase C isoform CD45RA-,"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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26 "alpha-beta T cell receptor complex+, receptor-type tyrosine-protein"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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27 "phosphatase C isoform CD45RO+, interleukin-7 receptor subunit alpha+,"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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28 "CD3+, CD44 moleculehi, interleukin-2 receptor subunit betahi ] 4) {"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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29 "CCR3-, CCR7- } CD8-, CD4+ ( ) [ L-selectin-, interleukin-7 receptor"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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30 "subunit alpha-, alpha-beta T cell receptor complex+, CD69 molecule+,"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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31 "interleukin-2 receptor subunit alpha+, ADP-ribosyl cyclase 1+, MHC"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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32 "class II histocompatibility antigen alpha chain HLA-DRA+, CD3+ ] 5) {"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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33 "CCR3-, CCR7- } CD8-, CD4+ ( ) [ interleukin-2 receptor subunit"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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34 "alpha-, alpha-beta T cell receptor complex+, receptor-type"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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35 "tyrosine-protein phosphatase C isoform CD45RO+, interleukin-7"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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36 "receptor subunit alpha+, CD3+, CD44 moleculehi, interleukin-2"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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37 "receptor subunit betahi ] + more"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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38 Score (Out of 1) "1) 0.167 2) 0.125 3) 0.091 4) -0.2 5) -0.222 + more"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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39 Cell ID "1) CL_0001044 2) CL_0002038 3) CL_0000905 4) CL_0001043 5) CL_0000897"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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40 "+ more"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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41 Cell Label "1) effector CD4-positive, alpha-beta T cell 2) T follicular helper"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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42 "cell 3) effector memory CD4-positive, alpha-beta T cell 4) activated"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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43 "CD4-positive, alpha-beta T cell, human 5) CD4-positive, alpha-beta"
62d8985a41e2 "planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
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44 "memory T cell + more"