view test-data/flowcl_pop01.txt @ 1:62d8985a41e2 draft default tip

"planemo upload for repository https://github.com/ImmPortDB/immport-galaxy-tools/tree/master/flowtools/profile_cl commit 5cdc32e68f9ec685f9890902c5ecc75047248361"
author azomics
date Thu, 23 Jul 2020 08:58:29 -0400
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                      [,1]                                                                   
Short marker names    "CD4+CCR3-CD8-CCR7-"                                                   
Ontology marker names "CD4 molecule, C-C chemokine receptor type 3, T cell receptor"         
                      "co-receptor CD8, C-C chemokine receptor type 7"                       
Experiment markers    "CD4,CCR3,CD8,CCR7"                                                    
Ontology exper. names "CD4 molecule, C-C chemokine receptor type 3, T cell receptor"         
                      "co-receptor CD8, C-C chemokine receptor type 7"                       
Successful Match?     "No"                                                                   
Marker ID             "1) PR_000001004, PR_000025402, PR_000001203 2) PR_000001004,"         
                      "PR_000025402, PR_000001203 3) PR_000001004, PR_000025402,"            
                      "PR_000001203 4) PR_000001004, PR_000025402 5) PR_000001004,"          
                      "PR_000025402 + more"                                                  
Marker Label          "1) CD4 molecule, T cell receptor co-receptor CD8, C-C chemokine"      
                      "receptor type 7 2) CD4 molecule, T cell receptor co-receptor CD8, C-C"
                      "chemokine receptor type 7 3) CD4 molecule, T cell receptor"           
                      "co-receptor CD8, C-C chemokine receptor type 7 4) CD4 molecule, T"    
                      "cell receptor co-receptor CD8 5) CD4 molecule, T cell receptor"       
                      "co-receptor CD8 + more"                                               
Marker Key            "1) { CCR3- } CD8-, CCR7-, CD4+ ( ) [ alpha-beta T cell receptor"      
                      "complex+, receptor-type tyrosine-protein phosphatase C isoform"       
                      "CD45RA+, CD3+ ] 2) { CCR3- } CD8-, CCR7-, CD4+ ( ) [ alpha-beta T"    
                      "cell receptor complex+, C-X-C chemokine receptor type 5+, inducible"  
                      "T-cell costimulator+, programmed cell death protein 1+, CD3+ ] 3) {"  
                      "CCR3- } CD8-, CCR7-, CD4+ ( ) [ interleukin-2 receptor subunit"       
                      "alpha-, receptor-type tyrosine-protein phosphatase C isoform CD45RA-,"
                      "alpha-beta T cell receptor complex+, receptor-type tyrosine-protein"  
                      "phosphatase C isoform CD45RO+, interleukin-7 receptor subunit alpha+,"
                      "CD3+, CD44 moleculehi, interleukin-2 receptor subunit betahi ] 4) {"  
                      "CCR3-, CCR7- } CD8-, CD4+ ( ) [ L-selectin-, interleukin-7 receptor"  
                      "subunit alpha-, alpha-beta T cell receptor complex+, CD69 molecule+," 
                      "interleukin-2 receptor subunit alpha+, ADP-ribosyl cyclase 1+, MHC"   
                      "class II histocompatibility antigen alpha chain HLA-DRA+, CD3+ ] 5) {"
                      "CCR3-, CCR7- } CD8-, CD4+ ( ) [ interleukin-2 receptor subunit"       
                      "alpha-, alpha-beta T cell receptor complex+, receptor-type"           
                      "tyrosine-protein phosphatase C isoform CD45RO+, interleukin-7"        
                      "receptor subunit alpha+, CD3+, CD44 moleculehi, interleukin-2"        
                      "receptor subunit betahi ] + more"                                     
Score (Out of 1)      "1) 0.167 2) 0.125 3) 0.091 4) -0.2 5) -0.222 + more"                  
Cell ID               "1) CL_0001044 2) CL_0002038 3) CL_0000905 4) CL_0001043 5) CL_0000897"
                      "+ more"                                                               
Cell Label            "1) effector CD4-positive, alpha-beta T cell 2) T follicular helper"   
                      "cell 3) effector memory CD4-positive, alpha-beta T cell 4) activated" 
                      "CD4-positive, alpha-beta T cell, human 5) CD4-positive, alpha-beta"   
                      "memory T cell + more"