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comparison immuneml_train_ml_model.xml @ 19:051d349fdc8c draft default tip

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"planemo upload commit 5ffe9db26c26d30c923c812b69346d95948e9cd0"
author immuneml
date Tue, 05 Apr 2022 10:11:52 +0000
parents cd57c1c66f8b
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18:697c2b98a466 19:051d349fdc8c
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61 - Archive: ML model training: a .zip file containing the complete output folder as it was produced by immuneML. This folder 61 - Archive: ML model training: a .zip file containing the complete output folder as it was produced by immuneML. This folder
62 contains the output of the TrainMLModel instruction including all trained models and their predictions, and report results. 62 contains the output of the TrainMLModel instruction including all trained models and their predictions, and report results.
63 Furthermore, the folder contains the complete YAML specification file for the immuneML run, the HTML output and a log file. 63 Furthermore, the folder contains the complete YAML specification file for the immuneML run, the HTML output and a log file.
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65 - optimal_ml_settings.zip: a .zip file containing the raw files for the optimal trained ML settings (ML model, encoding, and 65 - optimal_ml_settings.zip: a .zip file containing the raw files for the optimal trained ML settings (ML model, encoding). This .zip file can subsequently be used as an input when applying previously trained ML models to a new dataset. Currently, this can only be done locally using the command-line interface.
66 optionally preprocessing steps). This .zip file can subsequently be used as an input when `applying previously trained ML models to a new AIRR dataset in Galaxy <https://docs.immuneml.uio.no/latest/galaxy/galaxy_apply_ml_models.html>`_.
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68 ]]> 67 ]]>
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70 </help> 69 </help>
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