Mercurial > repos > in_silico > cravat_annotate_mutations

annotate cravat_annotate/cravat_annotate.xml @ 14:a28f1f52eb93 draft

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author in_silico
date Tue, 12 Jun 2018 12:04:45 -0400
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1 <tool id="cravat_query" name="CRAVAT Query" version="1.0.0">
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2 <description>Queries CRAVAT for cancer annotation</description>
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3 <command interpreter="python">cravat_annotate.py $input $output</command>
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5 <inputs>
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6 <param format="tabular" name="input" type="data" label="Source file"/>
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7 </inputs>
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9 <outputs>
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10 <data format="tabular" name="output" />
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11 </outputs>
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13 <tests>
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14 <test>
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15 <param name="input" value="input_call.txt"/>
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16 <output name="output" file="Galaxy23-[CRAVAT_Query_on_data_22].tabular"/>
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17 </test>
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18 </tests>
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20 <help>
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21 This tool queries CRAVAT for cancer annotation.
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22 </help>
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24 </tool>
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