comparison cravat_annotate/cravat_annotate.xml @ 28:4ca9ce54642f draft

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author in_silico
date Wed, 18 Jul 2018 10:25:55 -0400
parents c5b3d80c43e6
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27:a7e641d146f5 28:4ca9ce54642f
1 <tool id="cravat_query" name="CRAVAT Query" version="1.0.0">
2 <description>Queries CRAVAT for cancer annotation</description>
3 <command interpreter="python">cravat_annotate.py -i $input -o $output</command>
4
5 <inputs>
6 <param format="tabular" name="input" type="data" label="Source file"/>
7 </inputs>
8
9 <outputs>
10 <data format="tabular" name="output" />
11 </outputs>
12
13 <tests>
14 <test>
15 <param name="input" value="input_call.txt"/>
16 <output name="output" file="Galaxy23-[CRAVAT_Query_on_data_22].tabular"/>
17 </test>
18 </tests>
19
20 <help>
21 This tool queries CRAVAT for cancer annotation.
22 </help>
23
24 </tool>
25