Mercurial > repos > iracooke > mascot
view tool-data/pepxml_databases.loc.sample @ 0:b81d7a0466a6
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author | iracooke |
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date | Sun, 06 Jan 2013 19:14:28 -0500 |
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children | 327b2d99d4c5 |
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#This file lists the names of protein databases installed locally in protk. # These are used by omssa and x!tandem as well as the "mascot to pepxml" tool # In order to combine search results with Interprophet searches must be run against an identical database # # Entries should follow the be structured as follows # Display_name omssa_tandem_dbname dbkey # # Swissprot spall_ spall spall_ Combined PlasmboDB (falciparum) and Swissprot Human plasmodb_pfalciparum_sphuman_ plasmodb_pfalciparum_sphuman plasmodb_pfalciparum_sphuman_ Swissprot Human sphuman_ sphuman sphuman_ Combined Swissprot/TRembl Human sptrhuman_ sptrhuman sptrhuman_ Swissprot Mouse spmouse_ spmouse spmouse_